RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CHST14Q8NCH0 376 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 OR2AP1Q8NGE2 309 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 GAB3Q8WWW8 586 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 RLN3Q8WXF3 142 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 FATE1Q969F0 183 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 PHOX2BQ99453 314 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 HEMGNQ9BXL5 484 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 OSBPL8Q9BZF1 889 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 TM6SF2Q9BZW4 377 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 TRMT1Q9NXH9 659 aaKnown RBP13.14□□□□□ -0.31
SMPD1-202ENST00000526280 USP36Q9P275 1121 aaKnown RBP13.14□□□□□ -0.31
SMPD1-202ENST00000526280 HECAQ9UBI9 543 aaPredicted RBP13.14□□□□□ -0.31
SMPD1-202ENST00000526280 LHX3Q9UBR4 397 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 SCML1Q9UN30 329 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 R4GN57 208 aa13.14□□□□□ -0.31
SMPD1-202ENST00000526280 MID1O15344 667 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 ADH1BP00325 375 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 IL1BP01584 269 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 IGLV3-19P01714 112 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 DNTTP04053 509 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 CTSLP07711 333 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 ACADMP11310 421 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 C5AR1P21730 350 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 TGM2P21980 687 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 CHRNA3P32297 505 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 SLC8A1P32418 973 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 TPMTP51580 245 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 CCNHP51946 323 aaPredicted RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 SNRPD1P62314 119 aaKnown RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 SLC10A7Q0GE19 358 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 SRSF5Q13243 272 aaKnown RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 ZNF211Q13398 564 aaPredicted RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 BYSLQ13895 437 aaKnown RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 LBRQ14739 615 aaKnown RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 PDK1Q15118 436 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 RPS6KA1Q15418 735 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 MYLK3Q32MK0 819 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 TMCO4Q5TGY1 634 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 FAM46CQ5VWP2 391 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 TIGD7Q6NT04 549 aaPredicted RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 AADACL2Q6P093 401 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 BBS12Q6ZW61 710 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 CACUL1Q86Y37 369 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 FRMD1Q8N878 549 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 TMIEQ8NEW7 156 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 MAML1Q92585 1016 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 HDAC11Q96DB2 347 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 OLFM3Q96PB7 478 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 HEPHQ9BQS7 1158 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 HERPUD2Q9BSE4 406 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 PABPC3Q9H361 631 aaKnown RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 CD93Q9NPY3 652 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 SAE1Q9UBE0 346 aaPredicted RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 IL36AQ9UHA7 158 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 SARDHQ9UL12 918 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 INVSQ9Y283 1065 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 VPS13AQ96RL7 3174 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 PIEZO1Q92508 2521 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 SHROOM3Q8TF72 1996 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 IGHV1OR15-9A0A0B4J2B8 117 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 MATN3O15232 486 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 POP4O95707 220 aaKnown RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 IGSF6O95976 241 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 PRNPP04156 253 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 PECAM1P16284 738 aaPredicted RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 NBL1P41271 181 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 PSMD8P48556 350 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 ZNF33AQ06730 810 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 PPIDQ08752 370 aaKnown RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 NSUN2Q08J23 767 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 HNRNPDQ14103 355 aaKnown RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 TTC31Q49AM3 519 aaPredicted RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 ARSIQ5FYB1 569 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 ATXN7L2Q5T6C5 722 aaPredicted RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 MARC1Q5VT66 337 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 USP30Q70CQ3 517 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 BZW1Q7L1Q6 419 aaKnown RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 FAM160A2Q8N612 972 aaPredicted RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 TEX26Q8N6G2 289 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 TSEN2Q8NCE0 465 aaKnown RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 CCNYQ8ND76 341 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 PIP4K2CQ8TBX8 421 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 LRRN4Q8WUT4 740 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 NSMCE1Q8WV22 266 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 P3H4Q92791 437 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 VOPP1Q96AW1 172 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 SPACA7Q96KW9 195 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 GDAP1L1Q96MZ0 367 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 PSKH2Q96QS6 385 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 LGMNQ99538 433 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 CINPQ9BW66 212 aaPredicted RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 TLR10Q9BXR5 811 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 BRD8Q9H0E9 1235 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 SEPT3Q9UH03 358 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 MBD1Q9UIS9 605 aaPredicted RBP13.13□□□□□ -0.31
SMPD1-202ENST00000526280 CYP8B1Q9UNU6 501 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 WASF2Q9Y6W5 498 aa13.13□□□□□ -0.31
SMPD1-202ENST00000526280 ABCA7Q8IZY2 2146 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 PLXND1Q9Y4D7 1925 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 GOLGA6L9A6NEM1 432 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms