RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 ADH1BP00325 375 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 PECAM1P16284 738 aaPredicted RBP21.09■□□□□ 0.97
CD44-222ENST00000526025 DNA2P51530 1060 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 RHOAP61586 193 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 NOMO1Q15155 1222 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 TSSK4Q6SA08 328 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 NPNTQ6UXI9 565 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 LEKR1Q6ZMV7 388 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 CCDC13Q8IYE1 715 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 STK40Q8N2I9 435 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 ZBTB44Q8NCP5 570 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 TMIEQ8NEW7 156 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 PRCCQ92733 491 aaPredicted RBP21.09■□□□□ 0.97
CD44-222ENST00000526025 SIPA1Q96FS4 1042 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 CINPQ9BW66 212 aaPredicted RBP21.09■□□□□ 0.97
CD44-222ENST00000526025 BCCIPQ9P287 314 aaKnown RBP eCLIP21.09■□□□□ 0.97
CD44-222ENST00000526025 LHX3Q9UBR4 397 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 PCDHGA2Q9Y5H1 932 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 SPAG17Q6Q759 2223 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 MTSS1O43312 755 aa21.08■□□□□ 0.97
CD44-222ENST00000526025 ZNF217O75362 1048 aa21.08■□□□□ 0.97
CD44-222ENST00000526025 IGLV3-19P01714 112 aa21.08■□□□□ 0.97
CD44-222ENST00000526025 PRNPP04156 253 aa21.08■□□□□ 0.97
CD44-222ENST00000526025 CNR2P34972 360 aa21.08■□□□□ 0.97
CD44-222ENST00000526025 RPS14P62263 151 aaKnown RBP21.08■□□□□ 0.97
CD44-222ENST00000526025 IFI35P80217 286 aaPredicted RBP21.08■□□□□ 0.97
CD44-222ENST00000526025 SLC10A7Q0GE19 358 aa21.08■□□□□ 0.97
CD44-222ENST00000526025 SFSWAPQ12872 951 aaKnown RBP21.08■□□□□ 0.97
CD44-222ENST00000526025 BYSLQ13895 437 aaKnown RBP21.08■□□□□ 0.97
CD44-222ENST00000526025 GRM3Q14832 879 aa21.08■□□□□ 0.97
CD44-222ENST00000526025 PRKD1Q15139 912 aaPredicted RBP21.08■□□□□ 0.97
CD44-222ENST00000526025 LLGL1Q15334 1064 aa21.08■□□□□ 0.97
CD44-222ENST00000526025 RALGPS1Q5JS13 557 aa21.08■□□□□ 0.97
CD44-222ENST00000526025 CCDC181Q5TID7 509 aa21.08■□□□□ 0.97
CD44-222ENST00000526025 MARC1Q5VT66 337 aa21.08■□□□□ 0.97
CD44-222ENST00000526025 FAM46CQ5VWP2 391 aa21.08■□□□□ 0.97
CD44-222ENST00000526025 AADACL2Q6P093 401 aa21.08■□□□□ 0.97
CD44-222ENST00000526025 DPY19L3Q6ZPD9 716 aa21.08■□□□□ 0.97
CD44-222ENST00000526025 CCNYQ8ND76 341 aa21.08■□□□□ 0.97
CD44-222ENST00000526025 PRSS33Q8NF86 280 aa21.08■□□□□ 0.97
CD44-222ENST00000526025 FRMD8P1Q9BZ68 369 aaPredicted RBP21.08■□□□□ 0.97
CD44-222ENST00000526025 USP36Q9P275 1121 aaKnown RBP21.08■□□□□ 0.97
CD44-222ENST00000526025 PPM1HQ9ULR3 514 aa21.08■□□□□ 0.97
CD44-222ENST00000526025 C1QTNF3-AMACRE9PGA6 284 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 CES2O00748 559 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 MAP3K6O95382 1288 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 POP4O95707 220 aaKnown RBP21.07■□□□□ 0.96
CD44-222ENST00000526025 C5AR1P21730 350 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 CHRNA3P32297 505 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 MAPK8P45983 427 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 CCNHP51946 323 aaPredicted RBP21.07■□□□□ 0.96
CD44-222ENST00000526025 PTPN5P54829 565 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 RAD51Q06609 339 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 TCF15Q12870 199 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 ZNF235Q14590 738 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 CST6Q15828 149 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 SLC13A5Q86YT5 568 aaPredicted RBP21.07■□□□□ 0.96
CD44-222ENST00000526025 TFB1MQ8WVM0 346 aaKnown RBP21.07■□□□□ 0.96
CD44-222ENST00000526025 TRIM44Q96DX7 344 aaPredicted RBP21.07■□□□□ 0.96
CD44-222ENST00000526025 PBKQ96KB5 322 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 LGMNQ99538 433 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 MGME1Q9BQP7 344 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 HEPHQ9BQS7 1158 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 CPEB1Q9BZB8 566 aaKnown RBP21.07■□□□□ 0.96
CD44-222ENST00000526025 TM6SF2Q9BZW4 377 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 TNKS2Q9H2K2 1166 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 IL36AQ9UHA7 158 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 HCN4Q9Y3Q4 1203 aa21.07■□□□□ 0.96
CD44-222ENST00000526025 ENC1O14682 589 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 LILRB5O75023 590 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 DNTTP04053 509 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 CCNB1P14635 433 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 MMP13P45452 471 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 FNTBP49356 437 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 GNG11P61952 73 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 OTUD4Q01804 1114 aaKnown RBP21.06■□□□□ 0.96
CD44-222ENST00000526025 DMWDQ09019 674 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 MYLK3Q32MK0 819 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 TTC31Q49AM3 519 aaPredicted RBP21.06■□□□□ 0.96
CD44-222ENST00000526025 SLC45A4Q5BKX6 768 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 ALG1LQ6GMV1 187 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 ZC3H14Q6PJT7 736 aaKnown RBP21.06■□□□□ 0.96
CD44-222ENST00000526025 USP30Q70CQ3 517 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 C11orf74Q86VG3 221 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 PGBD3Q8N328 593 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 ACTL9Q8TC94 416 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 MAIP1Q8WWC4 291 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 QKIQ96PU8 341 aaKnown RBP eCLIP21.06■□□□□ 0.96
CD44-222ENST00000526025 IL12RB2Q99665 862 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 OSBPL1AQ9BXW6 950 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 PABPC3Q9H361 631 aaKnown RBP21.06■□□□□ 0.96
CD44-222ENST00000526025 ITM2CQ9NQX7 267 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 SAE1Q9UBE0 346 aaPredicted RBP21.06■□□□□ 0.96
CD44-222ENST00000526025 WASF2Q9Y6W5 498 aa21.06■□□□□ 0.96
CD44-222ENST00000526025 CTSLP07711 333 aa21.05■□□□□ 0.96
CD44-222ENST00000526025 CR2P20023 1033 aa21.05■□□□□ 0.96
CD44-222ENST00000526025 CES1P23141 567 aa21.05■□□□□ 0.96
CD44-222ENST00000526025 AP1S1P61966 158 aa21.05■□□□□ 0.96
CD44-222ENST00000526025 AP1B1Q10567 949 aa21.05■□□□□ 0.96
CD44-222ENST00000526025 USP39Q53GS9 565 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms