RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 SLC35E2BP0CK96 405 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 ARF4P18085 180 aaPredicted RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 GMPRP36959 345 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 CLCN3P51790 818 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 GRM3Q14832 879 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 SAMD4BQ5PRF9 694 aaKnown RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 TMEM130Q8N3G9 435 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 FSTL5Q8N475 847 aaPredicted RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 SMYD1Q8NB12 490 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 TNIP2Q8NFZ5 429 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 SGF29Q96ES7 293 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 NPY6RQ99463 290 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 QTRT2Q9H974 415 aaKnown RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 CAB39LQ9H9S4 337 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 MEAF6Q9HAF1 191 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 SPAG4Q9NPE6 437 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 C20orf96Q9NUD7 363 aaPredicted RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 CACNA2D2Q9NY47 1150 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 NCKIPSDQ9NZQ3 722 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 KLHL8Q9P2G9 620 aaPredicted RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 RUVBL2Q9Y230 463 aaKnown RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 TANC1Q9C0D5 1861 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 MYO18AQ92614 2054 aaKnown RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 CBFA2T3O75081 653 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 COQ9O75208 318 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 TRPA1O75762 1119 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 ARIH2O95376 493 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 IDO1P14902 403 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 ZBTB17Q13105 803 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 SEMA3BQ13214 749 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 DCAF4L1Q3SXM0 396 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 KRT80Q6KB66 452 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 LIMS2Q7Z4I7 341 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 LINC00523Q86TU6 105 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 CENPLQ8N0S6 344 aaPredicted RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 AFAP1L2Q8N4X5 818 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 LZTR1Q8N653 840 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 CLEC4CQ8WTT0 213 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 HDAC11Q96DB2 347 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 CCDC126Q96EE4 140 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 KIF12Q96FN5 646 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 WRNIP1Q96S55 665 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 NPAS2Q99743 824 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 MRPL57Q9BQC6 102 aaKnown RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 TMEM79Q9BSE2 394 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 DUS2Q9NX74 493 aaKnown RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 TRIP11Q15643 1979 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 CITO14578 2027 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 A0A087X1B8 175 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 STX16-NPEPL1H3BU86 382 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 TK2O00142 265 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 SOCS7O14512 581 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 XPO1O14980 1071 aaKnown RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 GJB1P08034 283 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 HSPA8P11142 646 aaKnown RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 PTPN1P18031 435 aaKnown RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 MYF6P23409 242 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 GALK1P51570 392 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 ESRRGP62508 458 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 COG7P83436 770 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 OTUD1Q5VV17 481 aaPredicted RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 BSPRYQ5W0U4 402 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 TMEM198Q66K66 360 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 FAM43BQ6ZT52 329 aaPredicted RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 GPR180Q86V85 440 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 HERC6Q8IVU3 1022 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 FIBCD1Q8N539 461 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 CCNYQ8ND76 341 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 LRTOMTQ8WZ04 291 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 LPGAT1Q92604 370 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 ROPN1LQ96C74 230 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 MFSD3Q96ES6 412 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 TMA16Q96EY4 203 aaKnown RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 VPS50Q96JG6 964 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 SLC2A13Q96QE2 648 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 YTHDF1Q9BYJ9 559 aaKnown RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 MRPL46Q9H2W6 279 aaKnown RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 HIPK3Q9H422 1215 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 IARS2Q9NSE4 1012 aaKnown RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 FAM49BQ9NUQ9 324 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 PIH1D1Q9NWS0 290 aaKnown RBP8.1□□□□□ -1.11
BDNF-213ENST00000525950 SLC39A10Q9ULF5 831 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 ACOT9Q9Y305 439 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 SH3GLB1Q9Y371 365 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 COL1A2P08123 1366 aa8.1□□□□□ -1.11
BDNF-213ENST00000525950 AQP12BA6NM10 295 aa8.09□□□□□ -1.11
BDNF-213ENST00000525950 E7ENX8 843 aa8.09□□□□□ -1.11
BDNF-213ENST00000525950 MYL3P08590 195 aa8.09□□□□□ -1.11
BDNF-213ENST00000525950 CD97P48960 835 aa8.09□□□□□ -1.11
BDNF-213ENST00000525950 SULT1E1P49888 294 aa8.09□□□□□ -1.11
BDNF-213ENST00000525950 SCNN1BP51168 640 aa8.09□□□□□ -1.11
BDNF-213ENST00000525950 NDST2P52849 883 aa8.09□□□□□ -1.11
BDNF-213ENST00000525950 CDH17Q12864 832 aa8.09□□□□□ -1.11
BDNF-213ENST00000525950 USP10Q14694 798 aaKnown RBP8.09□□□□□ -1.11
BDNF-213ENST00000525950 GLRA4Q5JXX5 417 aa8.09□□□□□ -1.11
BDNF-213ENST00000525950 NXNQ6DKJ4 435 aa8.09□□□□□ -1.11
BDNF-213ENST00000525950 NAPEPLDQ6IQ20 393 aa8.09□□□□□ -1.11
BDNF-213ENST00000525950 PAOXQ6QHF9 649 aa8.09□□□□□ -1.11
BDNF-213ENST00000525950 ERMP1Q7Z2K6 904 aa8.09□□□□□ -1.11
BDNF-213ENST00000525950 FAM131BQ86XD5 332 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms