RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 TDP1Q9NUW8 608 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 ETNK2Q9NVF9 386 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 SMPD4Q9NXE4 827 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 CALCOCO1Q9P1Z2 691 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 PPARGC1AQ9UBK2 798 aaKnown RBP7.23□□□□□ -1.25
VPS11-201ENST00000524454 OR12D3Q9UGF7 316 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 XPO7Q9UIA9 1087 aaKnown RBP7.23□□□□□ -1.25
VPS11-201ENST00000524454 GGA2Q9UJY4 613 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 NAALADL1Q9UQQ1 740 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 HEY1Q9Y5J3 304 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 WNT6Q9Y6F9 365 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 TEX264Q9Y6I9 313 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 WDFY4Q6ZS81 3184 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 ATXN2Q99700 1313 aaKnown RBP7.23□□□□□ -1.25
VPS11-201ENST00000524454 IGLV3-10A0A075B6K4 115 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 EXOC1LA0A1B0GW35 172 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 ZNF840PA6NDX5 716 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 KCNU1A8MYU2 1149 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 PSMD3O43242 534 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 MFSD11O43934 449 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 TMEM63AO94886 807 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 SUN1O94901 812 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 ACSL3O95573 720 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 IGLV3-27P01718 113 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 SHBGP04278 402 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 ZDHHC11BP0C7U3 371 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 IRF1P10914 325 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 ERCC2P18074 760 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 HDCP19113 662 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 DDX6P26196 483 aaKnown RBP eCLIP7.22□□□□□ -1.25
VPS11-201ENST00000524454 YWHAQP27348 245 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 RBL1P28749 1068 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 LMAN1P49257 510 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 VPS41P49754 854 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 IRAK1P51617 712 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 MAGOHP61326 146 aaKnown RBP7.22□□□□□ -1.25
VPS11-201ENST00000524454 BASP1P80723 227 aaKnown RBP7.22□□□□□ -1.25
VPS11-201ENST00000524454 PRR20EP86478 221 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 PRR20CP86479 221 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 PRR20DP86480 221 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 PRR20BP86481 221 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 PRR20AP86496 221 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 GBE1Q04446 702 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 PRKCQQ04759 706 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 FOXC1Q12948 553 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 PDIA2Q13087 525 aaKnown RBP7.22□□□□□ -1.25
VPS11-201ENST00000524454 NME3Q13232 169 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 AUHQ13825 339 aaKnown RBP7.22□□□□□ -1.25
VPS11-201ENST00000524454 PON2Q15165 354 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 LLGL1Q15334 1064 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 ANGPT1Q15389 498 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 ZNF77Q15935 545 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 KYNUQ16719 465 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 PARP6Q2NL67 630 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 RAB6CQ53S08 254 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 TIGD7Q6NT04 549 aaPredicted RBP7.22□□□□□ -1.25
VPS11-201ENST00000524454 TXNDC11Q6PKC3 985 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 ARHGEF18Q6ZSZ5 1173 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 ZC3H18Q86VM9 953 aaKnown RBP7.22□□□□□ -1.25
VPS11-201ENST00000524454 CCDC117Q8IWD4 279 aaPredicted RBP7.22□□□□□ -1.25
VPS11-201ENST00000524454 ZBED8Q8IZ13 594 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 SH3RF2Q8TEC5 729 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 PYROXD1Q8WU10 500 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 NDRG1Q92597 394 aaKnown RBP7.22□□□□□ -1.25
VPS11-201ENST00000524454 ATOH1Q92858 354 aaPredicted RBP7.22□□□□□ -1.25
VPS11-201ENST00000524454 WBP2Q969T9 261 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 AZIN2Q96A70 460 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 TBC1D31Q96DN5 1066 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 CHFRQ96EP1 664 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 SLC39A13Q96H72 371 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 SGSM3Q96HU1 749 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 SHDQ96IW2 340 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 TKTL2Q9H0I9 626 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 RAB6CQ9H0N0 254 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 CCSER2Q9H7U1 834 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 LRRC4CQ9HCJ2 640 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 HPS4Q9NQG7 708 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 TLR8Q9NR97 1041 aaKnown RBP7.22□□□□□ -1.25
VPS11-201ENST00000524454 RAB6BQ9NRW1 208 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 HAUS2Q9NVX0 235 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 GPATCH2LQ9NWQ4 482 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 OSER1Q9NX31 292 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 TRPM5Q9NZQ8 1165 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 DLGAP2Q9P1A6 1054 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 PSMC3IPQ9P2W1 217 aaPredicted RBP7.22□□□□□ -1.25
VPS11-201ENST00000524454 SAE1Q9UBE0 346 aaPredicted RBP7.22□□□□□ -1.25
VPS11-201ENST00000524454 ZNF180Q9UJW8 692 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 NUDT5Q9UKK9 219 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 SMG5Q9UPR3 1016 aaKnown RBP7.22□□□□□ -1.25
VPS11-201ENST00000524454 NEU3Q9UQ49 428 aa7.22□□□□□ -1.25
VPS11-201ENST00000524454 HBS1LQ9Y450 684 aaKnown RBP7.22□□□□□ -1.25
VPS11-201ENST00000524454 MYOFQ9NZM1 2061 aa7.21□□□□□ -1.25
VPS11-201ENST00000524454 SPECC1L-ADORA2AF8WAN1 911 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 RNF103O00237 685 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 LEFTY2O00292 366 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 PRPF4O43172 522 aaKnown RBP eCLIP7.21□□□□□ -1.26
VPS11-201ENST00000524454 COCHO43405 550 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 CACNG3O60359 315 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 LATS1O95835 1130 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 OAS1P00973 400 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms