RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	LILRB1	Q8NHL6	650 aa	Predicted RBP	4.58	□□□□□ -1.68
PCM1-223	ENST00000524356	USP6NL	Q92738	828 aa		4.58	□□□□□ -1.68
PCM1-223	ENST00000524356	TNPO1	Q92973	898 aa	Known RBP	4.58	□□□□□ -1.68
PCM1-223	ENST00000524356	JAKMIP2	Q96AA8	810 aa		4.58	□□□□□ -1.68
PCM1-223	ENST00000524356	FEM1C	Q96JP0	617 aa		4.58	□□□□□ -1.68
PCM1-223	ENST00000524356	UHRF1	Q96T88	793 aa	Predicted RBP	4.58	□□□□□ -1.68
PCM1-223	ENST00000524356	ANP32E	Q9BTT0	268 aa		4.58	□□□□□ -1.68
PCM1-223	ENST00000524356	GSTO2	Q9H4Y5	243 aa		4.58	□□□□□ -1.68
PCM1-223	ENST00000524356	LDAH	Q9H6V9	325 aa		4.58	□□□□□ -1.68
PCM1-223	ENST00000524356	HEYL	Q9NQ87	328 aa	Predicted RBP	4.58	□□□□□ -1.68
PCM1-223	ENST00000524356	ZDHHC7	Q9NXF8	308 aa		4.58	□□□□□ -1.68
PCM1-223	ENST00000524356	TRMT1	Q9NXH9	659 aa	Known RBP	4.58	□□□□□ -1.68
PCM1-223	ENST00000524356	TBK1	Q9UHD2	729 aa		4.58	□□□□□ -1.68
PCM1-223	ENST00000524356	ZNF215	Q9UL58	517 aa	Predicted RBP	4.58	□□□□□ -1.68
PCM1-223	ENST00000524356	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	4.58	□□□□□ -1.68
PCM1-223	ENST00000524356	LY75	O60449	1722 aa		4.58	□□□□□ -1.68
PCM1-223	ENST00000524356	QSER1	Q2KHR3	1735 aa		4.58	□□□□□ -1.68
PCM1-223	ENST00000524356	PDE4DIP	Q5VU43	2346 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	CD163L1	Q9NR16	1453 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	ADGRA2	Q96PE1	1338 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	STX16-NPEPL1	H3BU86	382 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	SH2B2	O14492	632 aa	Predicted RBP	4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	STX16	O14662	325 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	VILL	O15195	856 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	ADAM20	O43506	726 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	TBCA	O75347	108 aa	Known RBP	4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	DDN	O94850	711 aa	Predicted RBP	4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	SCG2	P13521	617 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	ALAD	P13716	330 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	STMN1	P16949	149 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	ATP5D	P30049	168 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	ECHS1	P30084	290 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	KCNJ5	P48544	419 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	PIK3CG	P48736	1102 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	ATP8B2	P98198	1209 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	FPGS	Q05932	587 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	STK4	Q13043	487 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	MAMLD1	Q13495	774 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	RAB32	Q13637	225 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	PTPN14	Q15678	1187 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	SLC5A9	Q2M3M2	681 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	TRIM71	Q2Q1W2	868 aa	Known RBP	4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	PRICKLE4	Q2TBC4	344 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	KRTCAP3	Q53RY4	240 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	TTC22	Q5TAA0	569 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	PRAMEF17	Q5VTA0	474 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	MCM10	Q7L590	875 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	CLNK	Q7Z7G1	428 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	SLFN11	Q7Z7L1	901 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	ANKRD13B	Q86YJ7	626 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	NUP93	Q8N1F7	819 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	PQLC1	Q8N2U9	271 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	MPP5	Q8N3R9	675 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	IWS1	Q96ST2	819 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	PI4K2A	Q9BTU6	479 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	SLC25A18	Q9H1K4	315 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	MANSC1	Q9H8J5	431 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	NOD2	Q9HC29	1040 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	KLC4	Q9NSK0	619 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	DECR2	Q9NUI1	292 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	TBC1D14	Q9P2M4	693 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	XPO7	Q9UIA9	1087 aa	Known RBP	4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	DERA	Q9Y315	318 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	KNSTRN	Q9Y448	316 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	DTNA	Q9Y4J8	743 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	N4BP2	Q86UW6	1770 aa	Predicted RBP	4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	KIAA1551	Q9HCM1	1747 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	TOGARAM1	Q9Y4F4	1720 aa		4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	CIC	Q96RK0	1608 aa	Predicted RBP	4.57	□□□□□ -1.68
PCM1-223	ENST00000524356	EVC2	Q86UK5	1308 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	SYNRG	Q9UMZ2	1314 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	ITSN1	Q15811	1721 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	CYP2D7	A0A087X1C5	515 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	FAM90A18P	A6NE21	464 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	FAM90A16P	A6NEW6	464 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	SERINC4	A6NH21	518 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	FAM90A9P	A6NNJ1	464 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	FAM90A5P	A8MXJ8	464 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356		E7EVH7	732 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	PTGES3L	E9PB15	166 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	TSPAN9	O75954	239 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	GLP2R	O95838	553 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	ALPL	P05186	524 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	TPM2	P07951	284 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	FAM90A15P	P0C7V4	464 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	FAM90A14P	P0C7W9	464 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	THEGL	P0DJG4	465 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	KCNA2	P16389	499 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	ATP5F1	P24539	256 aa	Predicted RBP	4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	MST1	P26927	711 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	EPHA8	P29322	1005 aa	Predicted RBP	4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	HARS2	P49590	506 aa	Known RBP	4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	ALDH18A1	P54886	795 aa	Known RBP	4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	EPS8	Q12929	822 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	DAZAP2	Q15038	168 aa	Predicted RBP	4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	ANKRD1	Q15327	319 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	KYNU	Q16719	465 aa		4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	CC2D1B	Q5T0F9	858 aa	Known RBP	4.56	□□□□□ -1.68
PCM1-223	ENST00000524356	FAM69A	Q5T7M9	428 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms