RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 SYT12Q8IV01 421 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 SLC41A1Q8IVJ1 513 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 RYBPQ8N488 228 aaPredicted RBP12.74□□□□□ -0.37
CCNC-216ENST00000523961 AADATQ8N5Z0 425 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 CHST14Q8NCH0 376 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 CCDC112Q8NEF3 446 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 OR2AP1Q8NGE2 309 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 TPCN2Q8NHX9 752 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 PCDH19Q8TAB3 1148 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 RAPGEF5Q92565 580 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 PIGKQ92643 395 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 FAF2Q96CS3 445 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 LRIG1Q96JA1 1093 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 GDAP1L1Q96MZ0 367 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 NEUROG2Q9H2A3 272 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 PDFQ9HBH1 243 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 VPS45Q9NRW7 570 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 SEMA4GQ9NTN9 838 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 DDX56Q9NY93 547 aaKnown RBP12.74□□□□□ -0.37
CCNC-216ENST00000523961 HECAQ9UBI9 543 aaPredicted RBP12.74□□□□□ -0.37
CCNC-216ENST00000523961 SERGEFQ9UGK8 458 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 IPO11Q9UI26 975 aaKnown RBP12.74□□□□□ -0.37
CCNC-216ENST00000523961 MFHAS1Q9Y4C4 1052 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 HYOU1Q9Y4L1 999 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 ALG6Q9Y672 507 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 LRRC72A6NJI9 287 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 METTL12A8MUP2 240 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 MEI4A8MW99 385 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 KPNA3O00505 521 aaPredicted RBP12.73□□□□□ -0.37
CCNC-216ENST00000523961 SLC7A4O43246 635 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 PSTPIP1O43586 416 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 LEFTY1O75610 366 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 PALMO75781 387 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 POP4O95707 220 aaKnown RBP12.73□□□□□ -0.37
CCNC-216ENST00000523961 IGSF6O95976 241 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 KRT1P04264 644 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 ZNF806P0C7X5 589 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 TNNT1P13805 278 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 TGM1P22735 817 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 ITPKAP23677 461 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 DRD3P35462 400 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 NAP1L1P55209 391 aaKnown RBP12.73□□□□□ -0.37
CCNC-216ENST00000523961 RAD51Q06609 339 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 KIF5AQ12840 1032 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 RFTN1Q14699 578 aaPredicted RBP12.73□□□□□ -0.37
CCNC-216ENST00000523961 PAFAH1B3Q15102 231 aaKnown RBP12.73□□□□□ -0.37
CCNC-216ENST00000523961 CYTH1Q15438 398 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 MYLK3Q32MK0 819 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 ARSIQ5FYB1 569 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 PLA2G2CQ5R387 149 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.73□□□□□ -0.37
CCNC-216ENST00000523961 RABEPKQ7Z6M1 372 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 DAAM2Q86T65 1068 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 NETO2Q8NC67 525 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 GRIN3AQ8TCU5 1115 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 PPP1R16AQ96I34 528 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 ZNF599Q96NL3 588 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 RNF157Q96PX1 679 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 LACRTQ9GZZ8 138 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 ZDHHC6Q9H6R6 413 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 PARD6AQ9NPB6 346 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 DYRK4Q9NR20 520 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 SALL4Q9UJQ4 1053 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 WASF2Q9Y6W5 498 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 GVINP1Q7Z2Y8 2422 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 GON4LQ3T8J9 2241 aa12.73□□□□□ -0.37
CCNC-216ENST00000523961 ARHGAP6O43182 974 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 NRDCO43847 1150 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 METAP1P53582 386 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 CNTN1Q12860 1018 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 IFI16Q16666 785 aaKnown RBP12.72□□□□□ -0.37
CCNC-216ENST00000523961 POM121L1PQ3SYA9 428 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 ATXN7L2Q5T6C5 722 aaPredicted RBP12.72□□□□□ -0.37
CCNC-216ENST00000523961 TMCO4Q5TGY1 634 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 DCAF12L1Q5VU92 463 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 PEAR1Q5VY43 1037 aaPredicted RBP12.72□□□□□ -0.37
CCNC-216ENST00000523961 NCBP2-AS2Q69YL0 99 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 ARHGAP36Q6ZRI8 547 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 TP53INP2Q8IXH6 220 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 KIAA2013Q8IYS2 634 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 RGL4Q8IZJ4 473 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 ATPAF2Q8N5M1 289 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 OR2T34Q8NGX1 318 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 OR14C36Q8NHC7 312 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 CEP76Q8TAP6 659 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.72□□□□□ -0.37
CCNC-216ENST00000523961 NSMCE1Q8WV22 266 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 DNASE2BQ8WZ79 361 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 FAM131CQ96AQ9 280 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 DESI2Q9BSY9 194 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 CINPQ9BW66 212 aaPredicted RBP12.72□□□□□ -0.37
CCNC-216ENST00000523961 MAK16Q9BXY0 300 aaKnown RBP12.72□□□□□ -0.37
CCNC-216ENST00000523961 KDM4CQ9H3R0 1056 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 GOLPH3Q9H4A6 298 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 C6orf106Q9H6K1 298 aaPredicted RBP12.72□□□□□ -0.37
CCNC-216ENST00000523961 LHX3Q9UBR4 397 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 SUSD2Q9UGT4 822 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 PILRBQ9UKJ0 227 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 TPX2Q9ULW0 747 aaKnown RBP12.72□□□□□ -0.37
CCNC-216ENST00000523961 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms