RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 CCNHP51946 323 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 GEMIN4P57678 1058 aaKnown RBP18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 TPI1P60174 286 aa18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 SPECC1LQ69YQ0 1117 aa18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 ALKBH5Q6P6C2 394 aaKnown RBP18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 ZNF354CQ86Y25 554 aa18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 PLPP6Q8IY26 295 aa18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 HMCESQ96FZ2 354 aa18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 KCTD15Q96SI1 283 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 TM6SF2Q9BZW4 377 aa18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 SLC32A1Q9H598 525 aa18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 HECAQ9UBI9 543 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 TPX2Q9ULW0 747 aaKnown RBP18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 DOCK9Q9BZ29 2069 aa18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 ZSCAN5CA6NGD5 496 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 EIF3CLB5ME19 914 aaKnown RBP18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 EEF2KO00418 725 aaKnown RBP18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 KCNK3O14649 394 aa18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 VILLO15195 856 aa18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 CER1O95813 267 aa18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 WNT1P04628 370 aa18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 ACAP1Q15027 740 aa18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 PARP15Q460N3 678 aa18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 CCDC122Q5T0U0 273 aa18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 PRPF39Q86UA1 669 aaKnown RBP18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 PSTKQ8IV42 348 aaKnown RBP18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 EIF3CQ99613 913 aaKnown RBP18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 NCAPGQ9BPX3 1015 aa18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 HDAC8Q9BY41 377 aa18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 DYRK4Q9NR20 520 aa18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 NENFQ9UMX5 172 aa18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 FNDC3AQ9Y2H6 1198 aaKnown RBP18.2■□□□□ 0.5
TRAPPC9-211ENST00000521700 A0A1W2PR77 199 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 SH3BP5O60239 455 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 CYP1A2P05177 515 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 ZNF883P0CG24 379 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 TCF4P15884 667 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 IL1R2P27930 398 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 MAT2AP31153 395 aaKnown RBP18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 GKP32189 559 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 PCK1P35558 622 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 EIF4A3P38919 411 aaKnown RBP18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 CTSKP43235 329 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 CCDC15Q0P6D6 951 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 SERINC3Q13530 473 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 RFX8Q6ZV50 586 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 ERN2Q76MJ5 926 aaKnown RBP18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 ADAT2Q7Z6V5 191 aaKnown RBP18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 TRIM69Q86WT6 500 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 VSTM4Q8IW00 320 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 RYBPQ8N488 228 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 OR2AP1Q8NGE2 309 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 OR8K1Q8NGG5 319 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 OR6K2Q8NGY2 324 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 TMEM131Q92545 1883 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 VOPP1Q96AW1 172 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 ARHGEF26Q96DR7 871 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 SERAC1Q96JX3 654 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 BTBD6Q96KE9 485 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 CAMK1GQ96NX5 476 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 LRRC19Q9H756 370 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 PREBQ9HCU5 417 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 AASDHPPTQ9NRN7 309 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 TM7SF3Q9NS93 570 aa18.19■□□□□ 0.5
TRAPPC9-211ENST00000521700 DAPK3O43293 454 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 RNGTTO60942 597 aaKnown RBP18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 TMCC1O94876 653 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 GSRP00390 522 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 ERCC2P18074 760 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 CD38P28907 300 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 PMLP29590 882 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 NDST2P52849 883 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 C21orf59P57076 290 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 SNRPD1P62314 119 aaKnown RBP18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 PIGHQ14442 188 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 MYLK3Q32MK0 819 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 INO80DQ53TQ3 878 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 PPP6R3Q5H9R7 873 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 NEK5Q6P3R8 708 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 NETO2Q8NC67 525 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 CASKIN2Q8WXE0 1202 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 PPP1R16AQ96I34 528 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 CELF6Q96J87 481 aaKnown RBP18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 DNAJC7Q99615 494 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 NUP85Q9BW27 656 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 SLC39A8Q9C0K1 460 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 ZDHHC6Q9H6R6 413 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 DONSONQ9NYP3 566 aa18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 CWC15Q9P013 229 aaKnown RBP18.18■□□□□ 0.5
TRAPPC9-211ENST00000521700 SPAARA0A1B0GVQ0 90 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 A0A1W2PQU0 124 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 H0Y8X5 98 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 POP4O95707 220 aaKnown RBP18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 ITGB7P26010 798 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 NUDT1P36639 197 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 HCAR3P49019 387 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 NEK3P51956 506 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 FAM193AP78312 1265 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 TRIM14Q14142 442 aa18.17■□□□□ 0.5
TRAPPC9-211ENST00000521700 CYTH1Q15438 398 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms