RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 J3KR12 359 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 BNIP3LO60238 219 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 MAFKO60675 156 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 CST8O60676 142 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 NEBLO76041 1014 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 IGLV3-19P01714 112 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 VAV1P15498 845 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 C5AR1P21730 350 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 OXTRP30559 389 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 CHRNA3P32297 505 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 P2RY2P41231 377 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 NBL1P41271 181 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 PSMD8P48556 350 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 DNA2P51530 1060 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 CCNHP51946 323 aaPredicted RBP12.71□□□□□ -0.37
HDAC2-211ENST00000521233 RPS14P62263 151 aaKnown RBP12.71□□□□□ -0.37
HDAC2-211ENST00000521233 DYNLT1P63172 113 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 CCDC15Q0P6D6 951 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 LBRQ14739 615 aaKnown RBP12.71□□□□□ -0.37
HDAC2-211ENST00000521233 RPS6KA1Q15418 735 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 SEL1L2Q5TEA6 688 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 CCDC181Q5TID7 509 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 KAZNQ674X7 775 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 SLC36A4Q6YBV0 504 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 LEKR1Q6ZMV7 388 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 USP30Q70CQ3 517 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 CEP68Q76N32 757 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 CACUL1Q86Y37 369 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 MMAAQ8IVH4 418 aaKnown RBP12.71□□□□□ -0.37
HDAC2-211ENST00000521233 TMIEQ8NEW7 156 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 P3H4Q92791 437 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 ERLEC1Q96DZ1 483 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 TSGA13Q96PP4 275 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 HEPHQ9BQS7 1158 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 OSBPL1AQ9BXW6 950 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 OSBPL8Q9BZF1 889 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 TM6SF2Q9BZW4 377 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 TNKS2Q9H2K2 1166 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 PABPC3Q9H361 631 aaKnown RBP12.71□□□□□ -0.37
HDAC2-211ENST00000521233 DYRK4Q9NR20 520 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 IL36AQ9UHA7 158 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 AMACRQ9UHK6 382 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 RAB23Q9ULC3 237 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 FZD4Q9ULV1 537 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 NCKAP1Q9Y2A7 1128 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 HEY1Q9Y5J3 304 aa12.71□□□□□ -0.37
HDAC2-211ENST00000521233 APOC4-APOC2K7ER74 178 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 DDX3YO15523 660 aaKnown RBP12.7□□□□□ -0.38
HDAC2-211ENST00000521233 MTSS1O43312 755 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 KIF5CO60282 957 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 TJP3O95049 919 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 POP4O95707 220 aaKnown RBP12.7□□□□□ -0.38
HDAC2-211ENST00000521233 IL1BP01584 269 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 APOC2P02655 101 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 CCNCP24863 283 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 TPMTP51580 245 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 TERF1P54274 439 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 PPIDQ08752 370 aaKnown RBP12.7□□□□□ -0.38
HDAC2-211ENST00000521233 HNRNPDQ14103 355 aaKnown RBP12.7□□□□□ -0.38
HDAC2-211ENST00000521233 ELF2Q15723 593 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 MAP7D1Q3KQU3 841 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 RALGPS1Q5JS13 557 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 MEI1Q5TIA1 1274 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 DPY19L3Q6ZPD9 716 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 ARHGAP36Q6ZRI8 547 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 RYBPQ8N488 228 aaPredicted RBP12.7□□□□□ -0.38
HDAC2-211ENST00000521233 CCNYQ8ND76 341 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 PIP4K2CQ8TBX8 421 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 GRIN3AQ8TCU5 1115 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 OLFM3Q96PB7 478 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 PSKH2Q96QS6 385 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 FAM129BQ96TA1 746 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 FERMT1Q9BQL6 677 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 SLC6A17Q9H1V8 727 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 CARD9Q9H257 536 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 EPC1Q9H2F5 836 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 ZDHHC6Q9H6R6 413 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 ITM2CQ9NQX7 267 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 HECAQ9UBI9 543 aaPredicted RBP12.7□□□□□ -0.38
HDAC2-211ENST00000521233 LHX3Q9UBR4 397 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 PACSIN2Q9UNF0 486 aaPredicted RBP12.7□□□□□ -0.38
HDAC2-211ENST00000521233 CYP8B1Q9UNU6 501 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 R4GN57 208 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 NUP205Q92621 2012 aa12.7□□□□□ -0.38
HDAC2-211ENST00000521233 IGHV1OR15-9A0A0B4J2B8 117 aa12.69□□□□□ -0.38
HDAC2-211ENST00000521233 KPNA3O00505 521 aaPredicted RBP12.69□□□□□ -0.38
HDAC2-211ENST00000521233 MATN3O15232 486 aa12.69□□□□□ -0.38
HDAC2-211ENST00000521233 MID1O15344 667 aa12.69□□□□□ -0.38
HDAC2-211ENST00000521233 SLC7A4O43246 635 aa12.69□□□□□ -0.38
HDAC2-211ENST00000521233 ZNF821O75541 412 aaPredicted RBP12.69□□□□□ -0.38
HDAC2-211ENST00000521233 KRT10P13645 584 aa12.69□□□□□ -0.38
HDAC2-211ENST00000521233 CD6P30203 668 aa12.69□□□□□ -0.38
HDAC2-211ENST00000521233 SLC8A1P32418 973 aa12.69□□□□□ -0.38
HDAC2-211ENST00000521233 MMP13P45452 471 aa12.69□□□□□ -0.38
HDAC2-211ENST00000521233 CSNK1DP48730 415 aa12.69□□□□□ -0.38
HDAC2-211ENST00000521233 AP1S1P61966 158 aa12.69□□□□□ -0.38
HDAC2-211ENST00000521233 NSUN2Q08J23 767 aaKnown RBP eCLIP12.69□□□□□ -0.38
HDAC2-211ENST00000521233 SIM2Q14190 667 aaPredicted RBP12.69□□□□□ -0.38
HDAC2-211ENST00000521233 CYTH1Q15438 398 aa12.69□□□□□ -0.38
HDAC2-211ENST00000521233 SPDYCQ5MJ68 293 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms