RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 VAT1Q99536 393 aa17.7■□□□□ 0.42
TRAM1-203ENST00000520700 LRFN3Q9BTN0 628 aa17.7■□□□□ 0.42
TRAM1-203ENST00000520700 RSPH9Q9H1X1 276 aaPredicted RBP17.7■□□□□ 0.42
TRAM1-203ENST00000520700 HOMER3Q9NSC5 361 aa17.7■□□□□ 0.42
TRAM1-203ENST00000520700 LHX3Q9UBR4 397 aa17.7■□□□□ 0.42
TRAM1-203ENST00000520700 RNF14Q9UBS8 474 aa17.7■□□□□ 0.42
TRAM1-203ENST00000520700 FARP1Q9Y4F1 1045 aaPredicted RBP17.7■□□□□ 0.42
TRAM1-203ENST00000520700 SAR1BQ9Y6B6 198 aa17.7■□□□□ 0.42
TRAM1-203ENST00000520700 NYNRINQ9P2P1 1898 aaKnown RBP17.69■□□□□ 0.42
TRAM1-203ENST00000520700 CKAP5Q14008 2032 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 BCLAF3A2AJT9 711 aaKnown RBP17.69■□□□□ 0.42
TRAM1-203ENST00000520700 LAMTOR5O43504 91 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 ALDH1A2O94788 518 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 APBB3O95704 486 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 POP4O95707 220 aaKnown RBP17.69■□□□□ 0.42
TRAM1-203ENST00000520700 RBP3P10745 1247 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 TDGF1P13385 188 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 CES1P23141 567 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 COPAP53621 1224 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 EIF3EP60228 445 aaKnown RBP17.69■□□□□ 0.42
TRAM1-203ENST00000520700 RHOAP61586 193 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 SATB1Q01826 763 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 ALG1LQ6GMV1 187 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 LEKR1Q6ZMV7 388 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 Q6ZVU0 165 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 MAML2Q8IZL2 1156 aaPredicted RBP17.69■□□□□ 0.42
TRAM1-203ENST00000520700 TMIEQ8NEW7 156 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 COG1Q8WTW3 980 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 NKD2Q969F2 451 aaPredicted RBP17.69■□□□□ 0.42
TRAM1-203ENST00000520700 HAUS1Q96CS2 278 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 MGME1Q9BQP7 344 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 CPEB1Q9BZB8 566 aaKnown RBP17.69■□□□□ 0.42
TRAM1-203ENST00000520700 HAUS2Q9NVX0 235 aa17.69■□□□□ 0.42
TRAM1-203ENST00000520700 R3HDM2Q9Y2K5 976 aaKnown RBP17.69■□□□□ 0.42
TRAM1-203ENST00000520700 ZBTB24O43167 697 aaPredicted RBP17.68■□□□□ 0.42
TRAM1-203ENST00000520700 VAV1P15498 845 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 CR2P20023 1033 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 CASQ1P31415 396 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 MMP13P45452 471 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 RECQLP46063 649 aaPredicted RBP17.68■□□□□ 0.42
TRAM1-203ENST00000520700 AP1B1Q10567 949 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 GRM3Q14832 879 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 LONRF2Q1L5Z9 754 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 MYLK3Q32MK0 819 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 ZNF528Q3MIS6 628 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 TEX44Q53QW1 395 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 SYT10Q6XYQ8 523 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 DPY19L3Q6ZPD9 716 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 DSG4Q86SJ6 1040 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 ZC3H18Q86VM9 953 aaKnown RBP17.68■□□□□ 0.42
TRAM1-203ENST00000520700 CDKL3Q8IVW4 592 aaPredicted RBP17.68■□□□□ 0.42
TRAM1-203ENST00000520700 ZNF366Q8N895 744 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 TSEN2Q8NCE0 465 aaKnown RBP17.68■□□□□ 0.42
TRAM1-203ENST00000520700 TSTD1Q8NFU3 115 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 HTR3CQ8WXA8 447 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 OR8D1Q8WZ84 308 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 NELL1Q92832 810 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 VOPP1Q96AW1 172 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 GDAP1L1Q96MZ0 367 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 FERMT1Q9BQL6 677 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 HEPHQ9BQS7 1158 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 CINPQ9BW66 212 aaPredicted RBP17.68■□□□□ 0.42
TRAM1-203ENST00000520700 FAM126AQ9BYI3 521 aaPredicted RBP17.68■□□□□ 0.42
TRAM1-203ENST00000520700 MTG2Q9H4K7 406 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 USP29Q9HBJ7 922 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 POLR3BQ9NW08 1133 aaPredicted RBP17.68■□□□□ 0.42
TRAM1-203ENST00000520700 RBM22Q9NW64 420 aaKnown RBP eCLIP17.68■□□□□ 0.42
TRAM1-203ENST00000520700 HECAQ9UBI9 543 aaPredicted RBP17.68■□□□□ 0.42
TRAM1-203ENST00000520700 PPM1HQ9ULR3 514 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 SCML1Q9UN30 329 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 DRG1Q9Y295 367 aaKnown RBP17.68■□□□□ 0.42
TRAM1-203ENST00000520700 ATP8A1Q9Y2Q0 1164 aa17.68■□□□□ 0.42
TRAM1-203ENST00000520700 CACNA1IQ9P0X4 2223 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 CFAP69A5D8W1 941 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 H7C0C1 242 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 PGRMC1O00264 195 aaKnown RBP17.67■□□□□ 0.42
TRAM1-203ENST00000520700 LIASO43766 372 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 RNASEH1O60930 286 aaKnown RBP17.67■□□□□ 0.42
TRAM1-203ENST00000520700 IGSF6O95976 241 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 JCHAINP01591 159 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 GABRG2P18507 467 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 STIP1P31948 543 aaKnown RBP17.67■□□□□ 0.42
TRAM1-203ENST00000520700 CHRNA3P32297 505 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 MAPK8P45983 427 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 ATP5OP48047 213 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 RAD51Q06609 339 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 ZNF235Q14590 738 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 OASLQ15646 514 aaKnown RBP17.67■□□□□ 0.42
TRAM1-203ENST00000520700 TMPRSS6Q8IU80 811 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 CREG2Q8IUH2 290 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 STK40Q8N2I9 435 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 PGBD5Q8N414 524 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 CNTD1Q8N815 330 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 MRGPRX1Q96LB2 322 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 TEKT5Q96M29 485 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 PRRX2Q99811 253 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 MKRN2Q9H000 416 aaKnown RBP17.67■□□□□ 0.42
TRAM1-203ENST00000520700 TNKS2Q9H2K2 1166 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 TRHDEQ9UKU6 1024 aa17.67■□□□□ 0.42
TRAM1-203ENST00000520700 TCRBV21S2A2A0A5A6 115 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms