RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 PARP15Q460N3 678 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 ACCSLQ4AC99 568 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 INO80DQ53TQ3 878 aaPredicted RBP11.33□□□□□ -0.6
PABPC1-214ENST00000520142 KCNT1Q5JUK3 1230 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 DCAF12L1Q5VU92 463 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 IL31Q6EBC2 164 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 DPY19L3Q6ZPD9 716 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 POLNQ7Z5Q5 900 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 CPNE8Q86YQ8 564 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 ARHGAP12Q8IWW6 846 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 C17orf53Q8N3J3 647 aaPredicted RBP11.33□□□□□ -0.6
PABPC1-214ENST00000520142 PCDH20Q8N6Y1 951 aaKnown RBP11.33□□□□□ -0.6
PABPC1-214ENST00000520142 NPWQ8N729 165 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 CHST14Q8NCH0 376 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 ACRBPQ8NEB7 543 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 CEP76Q8TAP6 659 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 ZNF564Q8TBZ8 553 aaPredicted RBP11.33□□□□□ -0.6
PABPC1-214ENST00000520142 NETO1Q8TDF5 533 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 BIRC7Q96CA5 298 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 HMCESQ96FZ2 354 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 DESI2Q9BSY9 194 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 TUBB2BQ9BVA1 445 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 EBF2Q9HAK2 575 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 OSGEPQ9NPF4 335 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 SPTLC3Q9NUV7 552 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 SLC6A14Q9UN76 642 aa11.33□□□□□ -0.6
PABPC1-214ENST00000520142 FCF1Q9Y324 198 aaKnown RBP11.33□□□□□ -0.6
PABPC1-214ENST00000520142 ATXN2Q99700 1313 aaKnown RBP11.33□□□□□ -0.6
PABPC1-214ENST00000520142 ZSCAN5CA6NGD5 496 aaPredicted RBP11.32□□□□□ -0.6
PABPC1-214ENST00000520142 MYO1FO00160 1098 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 EEF2KO00418 725 aaKnown RBP11.32□□□□□ -0.6
PABPC1-214ENST00000520142 SLC7A4O43246 635 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 LATO43561 262 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 RNASEH2AO75792 299 aaKnown RBP11.32□□□□□ -0.6
PABPC1-214ENST00000520142 ID4P47928 161 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 ADPRHP54922 357 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 HADHBP55084 474 aaKnown RBP11.32□□□□□ -0.6
PABPC1-214ENST00000520142 TAS2R38P59533 333 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 SFSWAPQ12872 951 aaKnown RBP11.32□□□□□ -0.6
PABPC1-214ENST00000520142 TRIM61Q5EBN2 209 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 CARD16Q5EG05 197 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 WDR45BQ5MNZ6 344 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 SYCP2LQ5T4T6 812 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 AGBL4Q5VU57 503 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 FAM46CQ5VWP2 391 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 DSG4Q86SJ6 1040 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 HDDC3Q8N4P3 179 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 TRIM58Q8NG06 486 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 PIP4K2CQ8TBX8 421 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 ALS2CR12Q96Q35 445 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 SLC39A8Q9C0K1 460 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 TNKS2Q9H2K2 1166 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 PCDH18Q9HCL0 1135 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 NCKAP1Q9Y2A7 1128 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 REXO2Q9Y3B8 237 aaKnown RBP11.32□□□□□ -0.6
PABPC1-214ENST00000520142 GON4LQ3T8J9 2241 aa11.32□□□□□ -0.6
PABPC1-214ENST00000520142 PLK4O00444 970 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 PLRG1O43660 514 aaKnown RBP11.31□□□□□ -0.6
PABPC1-214ENST00000520142 PRAMEF11O60813 436 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 GSRP00390 522 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 PRNPP04156 253 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 SDHBP21912 280 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 MAN1A1P33908 653 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 NOP2P46087 812 aaKnown RBP11.31□□□□□ -0.6
PABPC1-214ENST00000520142 CCR5P51681 352 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 CCNHP51946 323 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-214ENST00000520142 NAP1L1P55209 391 aaKnown RBP11.31□□□□□ -0.6
PABPC1-214ENST00000520142 GEMIN4P57678 1058 aaKnown RBP11.31□□□□□ -0.6
PABPC1-214ENST00000520142 BNC1Q01954 994 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 CNTN1Q12860 1018 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 PUM1Q14671 1186 aaKnown RBP eCLIP11.31□□□□□ -0.6
PABPC1-214ENST00000520142 SMTNL2Q2TAL5 461 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 AASDHQ4L235 1098 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-214ENST00000520142 PPP6R3Q5H9R7 873 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-214ENST00000520142 PIP5KL1Q5T9C9 394 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 STPG1Q5TH74 334 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 KIAA0895LQ68EN5 471 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 NCEH1Q6PIU2 408 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 RABEPKQ7Z6M1 372 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 REXO1L1PQ8IX06 675 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 TP53INP2Q8IXH6 220 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 C12orf50Q8NA57 414 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-214ENST00000520142 OR2T34Q8NGX1 318 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 SLC35G2Q8TBE7 412 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 CASKIN2Q8WXE0 1202 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 ARRDC3Q96B67 414 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 CSPG4P5Q96PW8 444 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 OMDQ99983 421 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 RTKNQ9BST9 563 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 EDEM2Q9BV94 578 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 KDM4CQ9H3R0 1056 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.31□□□□□ -0.6
PABPC1-214ENST00000520142 ETNK2Q9NVF9 386 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 DONSONQ9NYP3 566 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 CTTNBP2NLQ9P2B4 639 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 SUSD2Q9UGT4 822 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 EIF2B4Q9UI10 523 aaKnown RBP11.31□□□□□ -0.6
PABPC1-214ENST00000520142 MFHAS1Q9Y4C4 1052 aa11.31□□□□□ -0.6
PABPC1-214ENST00000520142 CACNA1EQ15878 2313 aa11.3□□□□□ -0.6
PABPC1-214ENST00000520142 A0A1B0GTW7 788 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms