RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 A0A1B0GVM2 712 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 TCAF2A6NFQ2 919 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 ITGA2BP08514 1039 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 NMBRP28336 390 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 CD86P42081 329 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 ZNF177Q13360 481 aaPredicted RBP27.34■■□□□ 1.97
COL13A1-212ENST00000520133 ZNF235Q14590 738 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 POU6F1Q14863 301 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 PCSK7Q16549 785 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 C6orf89Q6UWU4 347 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 FAM111AQ96PZ2 611 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 POLR1EQ9GZS1 481 aaKnown RBP27.34■■□□□ 1.97
COL13A1-212ENST00000520133 IL21Q9HBE4 155 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 ARNT2Q9HBZ2 717 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 NSMCE4AQ9NXX6 385 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 H3BNC9 293 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 DHRS4L1P0CG22 281 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 SPRP35270 261 aaPredicted RBP27.34■■□□□ 1.97
COL13A1-212ENST00000520133 ETFBP38117 255 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 ETV4P43268 484 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 SMAD3P84022 425 aaKnown RBP27.34■■□□□ 1.97
COL13A1-212ENST00000520133 PDE1BQ01064 536 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 IFT88Q13099 833 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 HSP90AA5PQ58FG0 334 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 TEDDM1Q5T9Z0 273 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 IL31Q6EBC2 164 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 PSRC1Q6PGN9 363 aaPredicted RBP27.34■■□□□ 1.97
COL13A1-212ENST00000520133 SETD3Q86TU7 594 aaPredicted RBP27.34■■□□□ 1.97
COL13A1-212ENST00000520133 NDUFAF2Q8N183 169 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 PDFQ9HBH1 243 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 PCMTD2Q9NV79 361 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 SMPD4Q9NXE4 827 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 STOML2Q9UJZ1 356 aa27.34■■□□□ 1.97
COL13A1-212ENST00000520133 A0A0D9SEW6 157 aa27.33■■□□□ 1.97
COL13A1-212ENST00000520133 ILVBLA1L0T0 632 aa27.33■■□□□ 1.97
COL13A1-212ENST00000520133 RHOCP08134 193 aa27.33■■□□□ 1.97
COL13A1-212ENST00000520133 DSC2Q02487 901 aa27.33■■□□□ 1.97
COL13A1-212ENST00000520133 YTHDF3Q7Z739 585 aaKnown RBP27.33■■□□□ 1.97
COL13A1-212ENST00000520133 ZNF75CPQ92670 426 aaPredicted RBP27.33■■□□□ 1.97
COL13A1-212ENST00000520133 SLC13A1Q9BZW2 595 aa27.33■■□□□ 1.97
COL13A1-212ENST00000520133 PLLPQ9Y342 182 aa27.33■■□□□ 1.97
COL13A1-212ENST00000520133 TCAF1Q9Y4C2 921 aa27.33■■□□□ 1.97
COL13A1-212ENST00000520133 MYLKQ15746 1914 aa27.33■■□□□ 1.97
COL13A1-212ENST00000520133 HDCP19113 662 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 CRHR1P34998 444 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 KDELC2Q7Z4H8 507 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 STRA8Q7Z7C7 330 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 MRPS31Q92665 395 aaKnown RBP27.32■■□□□ 1.96
COL13A1-212ENST00000520133 RAD9AQ99638 391 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 RBBP8Q99708 897 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 EMILIN2Q9BXX0 1053 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 PRKD2Q9BZL6 878 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 C12orf65Q9H3J6 166 aaKnown RBP27.32■■□□□ 1.96
COL13A1-212ENST00000520133 ATXN3LQ9H3M9 355 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 CXXC1Q9P0U4 656 aaPredicted RBP27.32■■□□□ 1.96
COL13A1-212ENST00000520133 USP15Q9Y4E8 981 aaPredicted RBP27.32■■□□□ 1.96
COL13A1-212ENST00000520133 OLFM2O95897 454 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 MMP2P08253 660 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 GABRR2P28476 465 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 OXCT1P55809 520 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 SMAD1Q15797 465 aaKnown RBP27.32■■□□□ 1.96
COL13A1-212ENST00000520133 TMEM240Q5SV17 173 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 LILRA6Q6PI73 481 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 ELMOD1Q8N336 334 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 PGBD5Q8N414 524 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 OR7D4Q8NG98 312 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 ARRDC2Q8TBH0 407 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 ATP2A3Q93084 1043 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 ZFRQ96KR1 1074 aaKnown RBP27.32■■□□□ 1.96
COL13A1-212ENST00000520133 CYP2S1Q96SQ9 504 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 ATP13A1Q9HD20 1204 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 PRKAG3Q9UGI9 489 aa27.32■■□□□ 1.96
COL13A1-212ENST00000520133 ALPK3Q96L96 1907 aa27.31■■□□□ 1.96
COL13A1-212ENST00000520133 PAMP19021 973 aa27.31■■□□□ 1.96
COL13A1-212ENST00000520133 HOXD9P28356 352 aaPredicted RBP27.31■■□□□ 1.96
COL13A1-212ENST00000520133 CSE1LP55060 971 aaKnown RBP27.31■■□□□ 1.96
COL13A1-212ENST00000520133 CDHR3Q6ZTQ4 885 aa27.31■■□□□ 1.96
COL13A1-212ENST00000520133 FAM47EQ6ZV65 393 aa27.31■■□□□ 1.96
COL13A1-212ENST00000520133 SPATA21Q7Z572 469 aa27.31■■□□□ 1.96
COL13A1-212ENST00000520133 UBE2Q1Q7Z7E8 422 aa27.31■■□□□ 1.96
COL13A1-212ENST00000520133 SRLQ86TD4 932 aa27.31■■□□□ 1.96
COL13A1-212ENST00000520133 ARL14EPQ8N8R7 260 aaPredicted RBP27.31■■□□□ 1.96
COL13A1-212ENST00000520133 SPON2Q9BUD6 331 aa27.31■■□□□ 1.96
COL13A1-212ENST00000520133 PHTF1Q9UMS5 762 aa27.31■■□□□ 1.96
COL13A1-212ENST00000520133 TBC1D30Q9Y2I9 924 aa27.31■■□□□ 1.96
COL13A1-212ENST00000520133 RRP15Q9Y3B9 282 aaKnown RBP27.31■■□□□ 1.96
COL13A1-212ENST00000520133 WDR91A4D1P6 747 aa27.3■■□□□ 1.96
COL13A1-212ENST00000520133 KDELR3O43731 214 aa27.3■■□□□ 1.96
COL13A1-212ENST00000520133 TSPAN3O60637 253 aa27.3■■□□□ 1.96
COL13A1-212ENST00000520133 ALDOAP04075 364 aaKnown RBP27.3■■□□□ 1.96
COL13A1-212ENST00000520133 SERPINH1P50454 418 aaKnown RBP27.3■■□□□ 1.96
COL13A1-212ENST00000520133 LIMK2P53671 638 aa27.3■■□□□ 1.96
COL13A1-212ENST00000520133 TXNDC8Q6A555 127 aa27.3■■□□□ 1.96
COL13A1-212ENST00000520133 SLC25A41Q8N5S1 370 aa27.3■■□□□ 1.96
COL13A1-212ENST00000520133 SP7Q8TDD2 431 aaPredicted RBP27.3■■□□□ 1.96
COL13A1-212ENST00000520133 WBP2Q969T9 261 aa27.3■■□□□ 1.96
COL13A1-212ENST00000520133 TADA1Q96BN2 335 aa27.3■■□□□ 1.96
COL13A1-212ENST00000520133 ZNF778Q96MU6 729 aa27.3■■□□□ 1.96
COL13A1-212ENST00000520133 AGAP2Q99490 1192 aa27.3■■□□□ 1.96
COL13A1-212ENST00000520133 SEMA3CQ99985 751 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms