RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 GALNT3Q14435 633 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 MED22Q15528 200 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 TXNDC8Q6A555 127 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 SUMO4Q6EEV6 95 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 TMCO3Q6UWJ1 677 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 LRIG3Q6UXM1 1119 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 KRT77Q7Z794 578 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 ARHGAP12Q8IWW6 846 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 ADGRF2Q8IZF7 708 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 TMEM217Q8N7C4 229 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 WIPF2Q8TF74 440 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 LARP4BQ92615 738 aaKnown RBP5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 CALML4Q96GE6 196 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 SCPEP1Q9HB40 452 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 INTS6Q9UL03 887 aaKnown RBP5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 PCDHGB5Q9Y5G0 923 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 CAPN7Q9Y6W3 813 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 SETD1BQ9UPS6 1966 aaKnown RBP5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 MST1RQ04912 1400 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 FAM237BA0A1B0GVD1 139 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 PTPN2P17706 415 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 YWHAQP27348 245 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 PLA2G5P39877 138 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 ARSFP54793 590 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 HSF1Q00613 529 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 POU5F1Q01860 360 aaKnown RBP5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 CSTF3Q12996 717 aaKnown RBP5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 ME3Q16798 604 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 CCDC96Q2M329 555 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 AKNAD1Q5T1N1 836 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 TBC1D9BQ66K14 1250 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 IGFL4Q6B9Z1 124 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 TTI2Q6NXR4 508 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 KLHL35Q6PF15 583 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 ZNF813Q6ZN06 617 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 PRPF39Q86UA1 669 aaKnown RBP5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 WDR5BQ86VZ2 330 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 CHSY1Q86X52 802 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 CCDC34Q96HJ3 373 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 CLMNQ96JQ2 1002 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 ASB2Q96Q27 587 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 HEMGNQ9BXL5 484 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 CXorf56Q9H5V9 222 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 SH2D4AQ9H788 454 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 KAT14Q9H8E8 782 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 FBRSL1Q9HCM7 1045 aaKnown RBP5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 IPO11Q9UI26 975 aaKnown RBP5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 ADAM18Q9Y3Q7 739 aa5.62□□□□□ -1.51
HMGB1P46-201ENST00000520062 A0A1W2PQF6 199 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 TARSL2A2RTX5 802 aaKnown RBP5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 CXorf65A6NEN9 183 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 CBY3A6NI87 242 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 A8MZ25 164 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 EIF3CLB5ME19 914 aaKnown RBP5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 USP17L23D6RBM5 183 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 P4HA2O15460 535 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 NFATC1O95644 943 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 NR2F1P10589 423 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 CYP2A6P11509 494 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 ACSL1P33121 698 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 PTGER1P34995 402 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 GARSP41250 739 aaKnown RBP5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 SNX16P57768 344 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 NIPAL4Q0D2K0 466 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 STK4Q13043 487 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 BECN1Q14457 450 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 RNPS1Q15287 305 aaKnown RBP5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 HIST2H2ACQ16777 129 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 MOB3CQ70IA8 216 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 CYB5R4Q7L1T6 521 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 ZNF627Q7L945 461 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 GSTA5Q7RTV2 222 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 AMIGO2Q86SJ2 522 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 IGFN1Q86VF2 1251 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 TAGAPQ8N103 731 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 ARL14EPQ8N8R7 260 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 GDPD5Q8WTR4 605 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 SLF1Q9BQI6 1058 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 MAK16Q9BXY0 300 aaKnown RBP5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 FTOQ9C0B1 505 aaKnown RBP eCLIP5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 HIPK3Q9H422 1215 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 SMARCAD1Q9H4L7 1026 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 ACTR5Q9H9F9 607 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 MLXIPLQ9NP71 852 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 IL17RBQ9NRM6 502 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 HAO1Q9UJM8 370 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 TLK1Q9UKI8 766 aa5.61□□□□□ -1.51
HMGB1P46-201ENST00000520062 ADGRF5Q8IZF2 1346 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 ZNF335Q9H4Z2 1342 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 CYP2D7A0A087X1C5 515 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 SLC22A23A1A5C7 686 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 FRMD3A2A2Y4 597 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 FAM157AC9JC47 383 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 EBAG9O00559 213 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 FOXN1O15353 648 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 LIASO43766 372 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 HNRNPCL1O60812 293 aaKnown RBP5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 PGM3O95394 542 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 GCP02774 474 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms