RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 NLGN3Q9NZ94 848 aa12.03□□□□□ -0.48
POLB-208ENST00000520008 PPARGC1AQ9UBK2 798 aaKnown RBP12.03□□□□□ -0.48
POLB-208ENST00000520008 PCDHB1Q9Y5F3 818 aa12.03□□□□□ -0.48
POLB-208ENST00000520008 RAI2Q9Y5P3 530 aa12.03□□□□□ -0.48
POLB-208ENST00000520008 HS3ST3A1Q9Y663 406 aa12.03□□□□□ -0.48
POLB-208ENST00000520008 TRPM6Q9BX84 2022 aa12.03□□□□□ -0.48
POLB-208ENST00000520008 HELZ2Q9BYK8 2649 aaKnown RBP12.02□□□□□ -0.49
POLB-208ENST00000520008 CFAP46Q8IYW2 2715 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 SPTY2D1-AS1A0A0U1RR47 76 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 POM121BA6NF01 834 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 A6NNZ2 444 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 ATXN7O15265 892 aaPredicted RBP12.02□□□□□ -0.49
POLB-208ENST00000520008 RAD51BO15315 384 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 FFAR2O15552 330 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 SPINT1O43278 529 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 AP1G1O43747 822 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 C1QL1O75973 258 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 MT-CO3P00414 261 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 GP1BAP07359 652 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 UCHL3P15374 230 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 L1CAMP32004 1257 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 CCNHP51946 323 aaPredicted RBP12.02□□□□□ -0.49
POLB-208ENST00000520008 NRG1Q02297 640 aaPredicted RBP12.02□□□□□ -0.49
POLB-208ENST00000520008 GNA12Q03113 381 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 SLC20A2Q08357 652 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 FZD2Q14332 565 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 DPCR1Q3MIW9 517 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 RETSATQ6NUM9 610 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 PARS2Q7L3T8 475 aaKnown RBP12.02□□□□□ -0.49
POLB-208ENST00000520008 NLRP14Q86W24 1093 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 FAM131BQ86XD5 332 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 BAP1Q92560 729 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 APOLD1Q96LR9 279 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 TUBGCP2Q9BSJ2 902 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 SLC17A9Q9BYT1 436 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 ATP13A1Q9HD20 1204 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 NDFIP2Q9NV92 336 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 FADS3Q9Y5Q0 445 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 GTF3C3Q9Y5Q9 886 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 ACTL7AQ9Y615 435 aa12.02□□□□□ -0.49
POLB-208ENST00000520008 SHROOM3Q8TF72 1996 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 TDRD6O60522 2096 aaKnown RBP12.01□□□□□ -0.49
POLB-208ENST00000520008 F8VZ95 297 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 TK2O00142 265 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 SCAMP1O15126 338 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 RRP8O43159 456 aaKnown RBP12.01□□□□□ -0.49
POLB-208ENST00000520008 OPA1O60313 960 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 SRGAP2O75044 1071 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 DXOO77932 396 aaKnown RBP12.01□□□□□ -0.49
POLB-208ENST00000520008 PCDH8O95206 1070 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 CSF2P04141 144 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 PRKCSHP14314 528 aaPredicted RBP12.01□□□□□ -0.49
POLB-208ENST00000520008 NME1P15531 152 aaKnown RBP12.01□□□□□ -0.49
POLB-208ENST00000520008 ERCC5P28715 1186 aaPredicted RBP12.01□□□□□ -0.49
POLB-208ENST00000520008 ACTN2P35609 894 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 RECQLP46063 649 aaPredicted RBP12.01□□□□□ -0.49
POLB-208ENST00000520008 RPS21P63220 83 aaKnown RBP12.01□□□□□ -0.49
POLB-208ENST00000520008 DAB2P98082 770 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 TLE3Q04726 772 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 RAPGEF1Q13905 1077 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 RAB6CQ53S08 254 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 CARD16Q5EG05 197 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 TPRG1LQ5T0D9 272 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 TAF3Q5VWG9 929 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 LRRC69Q6ZNQ3 347 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 Q6ZSR6 202 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 ZSCAN30Q86W11 494 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 DCP2Q8IU60 420 aaKnown RBP12.01□□□□□ -0.49
POLB-208ENST00000520008 FAM114A1Q8IWE2 563 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 PLPP6Q8IY26 295 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 LSM14AQ8ND56 463 aaKnown RBP12.01□□□□□ -0.49
POLB-208ENST00000520008 ZNF548Q8NEK5 533 aaPredicted RBP12.01□□□□□ -0.49
POLB-208ENST00000520008 ISG20Q96AZ6 181 aaKnown RBP12.01□□□□□ -0.49
POLB-208ENST00000520008 HIC2Q96JB3 615 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 FCRL3Q96P31 734 aaPredicted RBP12.01□□□□□ -0.49
POLB-208ENST00000520008 LENG8Q96PV6 779 aaPredicted RBP12.01□□□□□ -0.49
POLB-208ENST00000520008 HEPHQ9BQS7 1158 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 C1QTNF2Q9BXJ5 285 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 RAB6CQ9H0N0 254 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 USP29Q9HBJ7 922 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 KLF15Q9UIH9 416 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 NOCTQ9UK39 431 aaKnown RBP12.01□□□□□ -0.49
POLB-208ENST00000520008 FCF1Q9Y324 198 aaKnown RBP12.01□□□□□ -0.49
POLB-208ENST00000520008 ASXL3Q9C0F0 2248 aa12.01□□□□□ -0.49
POLB-208ENST00000520008 FAM170AA1A519 330 aa12□□□□□ -0.49
POLB-208ENST00000520008 GOLGA8SH3BPF8 625 aa12□□□□□ -0.49
POLB-208ENST00000520008 K7ESM1 405 aa12□□□□□ -0.49
POLB-208ENST00000520008 NEBLO76041 1014 aa12□□□□□ -0.49
POLB-208ENST00000520008 PAK4O96013 591 aaPredicted RBP12□□□□□ -0.49
POLB-208ENST00000520008 CYP1A1P04798 512 aaPredicted RBP12□□□□□ -0.49
POLB-208ENST00000520008 MMEP08473 750 aa12□□□□□ -0.49
POLB-208ENST00000520008 ALPPL2P10696 532 aa12□□□□□ -0.49
POLB-208ENST00000520008 ABL2P42684 1182 aa12□□□□□ -0.49
POLB-208ENST00000520008 HNRNPKP61978 463 aaKnown RBP eCLIP12□□□□□ -0.49
POLB-208ENST00000520008 HS1BP3Q53T59 392 aa12□□□□□ -0.49
POLB-208ENST00000520008 ZNF542PQ5EBM4 170 aa12□□□□□ -0.49
POLB-208ENST00000520008 PCSK4Q6UW60 755 aa12□□□□□ -0.49
POLB-208ENST00000520008 KDM7AQ6ZMT4 941 aa12□□□□□ -0.49
POLB-208ENST00000520008 TMC6Q7Z403 805 aa12□□□□□ -0.49
POLB-208ENST00000520008 PTAR1Q7Z6K3 402 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms