RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 VSIG1Q86XK7 387 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 PSTKQ8IV42 348 aaKnown RBP7.09□□□□□ -1.27
CPS1-210ENST00000518043 RCOR2Q8IZ40 523 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 ARHGAP18Q8N392 663 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 MMGT1Q8N4V1 131 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 PLD5Q8N7P1 536 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 PDZD8Q8NEN9 1154 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 SPATA4Q8NEY3 305 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 PCDH19Q8TAB3 1148 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 ASB11Q8WXH4 323 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 HSPH1Q92598 858 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 MRPL38Q96DV4 380 aaKnown RBP7.09□□□□□ -1.27
CPS1-210ENST00000518043 TCEAL4Q96EI5 215 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 PRMT1Q99873 361 aaKnown RBP7.09□□□□□ -1.27
CPS1-210ENST00000518043 TRIM62Q9BVG3 475 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 AP1M1Q9BXS5 423 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 KLC2Q9H0B6 622 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 SLC28A3Q9HAS3 691 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 GP6Q9HCN6 339 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 TLR8Q9NR97 1041 aaKnown RBP7.09□□□□□ -1.27
CPS1-210ENST00000518043 PCMTD2Q9NV79 361 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 ETNK2Q9NVF9 386 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 GFOD1Q9NXC2 390 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 DDX56Q9NY93 547 aaKnown RBP7.09□□□□□ -1.27
CPS1-210ENST00000518043 PRR13Q9NZ81 148 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.09□□□□□ -1.27
CPS1-210ENST00000518043 CWC15Q9P013 229 aaKnown RBP7.09□□□□□ -1.27
CPS1-210ENST00000518043 MARCH2Q9P0N8 246 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 COX16Q9P0S2 106 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 DNMT3BQ9UBC3 853 aaKnown RBP7.09□□□□□ -1.27
CPS1-210ENST00000518043 ZNF212Q9UDV6 495 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 ASB3Q9Y575 518 aa7.09□□□□□ -1.27
CPS1-210ENST00000518043 CAPN9O14815 690 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 DCLK1O15075 740 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 LINC01565O15544 149 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 SIGLEC6O43699 453 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 ZRANB2O95218 330 aaKnown RBP eCLIP7.08□□□□□ -1.28
CPS1-210ENST00000518043 SLU7O95391 586 aaKnown RBP7.08□□□□□ -1.28
CPS1-210ENST00000518043 PRAMEF1O95521 474 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 F9P00740 461 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 KLKB1P03952 638 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 HNRNPA1P09651 372 aaKnown RBP eCLIP7.08□□□□□ -1.28
CPS1-210ENST00000518043 GOT1P17174 413 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 GJA1P17302 382 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 TPP2P29144 1249 aaPredicted RBP7.08□□□□□ -1.28
CPS1-210ENST00000518043 ELF1P32519 619 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 CD96P40200 585 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 KCNQ1P51787 676 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 CDH6P55285 790 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 CKAP4Q07065 602 aaKnown RBP7.08□□□□□ -1.28
CPS1-210ENST00000518043 SERINC3Q13530 473 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 LRP8Q14114 963 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 VEPH1Q14D04 833 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 HADHQ16836 314 aaKnown RBP7.08□□□□□ -1.28
CPS1-210ENST00000518043 TCEAL5Q5H9L2 206 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 BRMS1LQ5PSV4 323 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 PPM1LQ5SGD2 360 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 C10orf120Q5SQS8 335 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 HECTD3Q5T447 861 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 ERMARDQ5T6L9 678 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 SEL1L2Q5TEA6 688 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 TXNDC8Q6A555 127 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 MRM1Q6IN84 353 aaKnown RBP7.08□□□□□ -1.28
CPS1-210ENST00000518043 SCYL2Q6P3W7 929 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 SYCE2Q6PIF2 218 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 RTL10Q7L3V2 364 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 ADAT2Q7Z6V5 191 aaKnown RBP7.08□□□□□ -1.28
CPS1-210ENST00000518043 C14orf80Q86SX3 495 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 RBM23Q86U06 439 aaKnown RBP7.08□□□□□ -1.28
CPS1-210ENST00000518043 TSPYL5Q86VY4 417 aaPredicted RBP7.08□□□□□ -1.28
CPS1-210ENST00000518043 MIB1Q86YT6 1006 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 TP53INP2Q8IXH6 220 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 NPWQ8N729 165 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 C12orf76Q8N812 135 aaPredicted RBP7.08□□□□□ -1.28
CPS1-210ENST00000518043 MYRIPQ8NFW9 859 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 SLC35B2Q8TB61 432 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 RNF139Q8WU17 664 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 HDAC7Q8WUI4 952 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 ATG4AQ8WYN0 398 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 GOLGA1Q92805 767 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 RBM41Q96IZ5 413 aaKnown RBP7.08□□□□□ -1.28
CPS1-210ENST00000518043 ZNF512Q96ME7 567 aaPredicted RBP7.08□□□□□ -1.28
CPS1-210ENST00000518043 SERPINB11Q96P15 392 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 CSPG4P5Q96PW8 444 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 NCAPGQ9BPX3 1015 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 FAM118BQ9BPY3 351 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 ZNF670Q9BS34 389 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 HEMGNQ9BXL5 484 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 HDAC8Q9BY41 377 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 DCLK3Q9C098 648 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 KLHL25Q9H0H3 589 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 TKTL2Q9H0I9 626 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 DDX47Q9H0S4 455 aaKnown RBP7.08□□□□□ -1.28
CPS1-210ENST00000518043 EPC1Q9H2F5 836 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 PLEKHA4Q9H4M7 779 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 DHX35Q9H5Z1 703 aaKnown RBP7.08□□□□□ -1.28
CPS1-210ENST00000518043 ATP13A1Q9HD20 1204 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 ARHGEF4Q9NR80 690 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 TRPM5Q9NZQ8 1165 aa7.08□□□□□ -1.28
CPS1-210ENST00000518043 SIRPGQ9P1W8 387 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms