RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 SLC7A4O43246 635 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 LEFTY1O75610 366 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 TMCC1O94876 653 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 GSRP00390 522 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 KDELR1P24390 212 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 CCNHP51946 323 aaPredicted RBP11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 SNRPD1P62314 119 aaKnown RBP11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 ARHGAP8P85298 464 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 IL10RBQ08334 325 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 CCDC15Q0P6D6 951 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 DPYSL3Q14195 570 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 SF3A2Q15428 464 aaKnown RBP11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 DUOXA1Q1HG43 343 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 ANKRD20A8PQ5CZ79 823 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 DCAF12L1Q5VU92 463 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 SLC23A3Q6PIS1 610 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 LRRC49Q8IUZ0 686 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 TP53INP2Q8IXH6 220 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 RGL4Q8IZJ4 473 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 NETO2Q8NC67 525 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 OR2T34Q8NGX1 318 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 OR14C36Q8NHC7 312 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 PCDH19Q8TAB3 1148 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 C1orf216Q8TAB5 229 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 RAPGEF5Q92565 580 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 BIRC7Q96CA5 298 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 LRIG1Q96JA1 1093 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 CALR3Q96L12 384 aaKnown RBP11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 CALN1Q9BXU9 219 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 SMOC1Q9H4F8 434 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 EVLQ9UI08 416 aaPredicted RBP11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 IPO11Q9UI26 975 aaKnown RBP11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 SALL4Q9UJQ4 1053 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 REXO2Q9Y3B8 237 aaKnown RBP11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 MFHAS1Q9Y4C4 1052 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 WASF2Q9Y6W5 498 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 DUSP10Q9Y6W6 482 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 NUMA1Q14980 2115 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 CFAP54Q96N23 3096 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 TBC1D3DA0A087WVF3 549 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 TBC1D3IA0A087WXS9 549 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 TBC1D3EA0A087X179 549 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 TBC1D3KA0A087X1G2 549 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 TBC1D3FA6NER0 549 aaPredicted RBP11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 LRRC72A6NJI9 287 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 C3orf70A6NLC5 250 aaPredicted RBP11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 BTNL10A8MVZ5 291 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 ZNF487B1APH4 448 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 PATE3B3GLJ2 98 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 TBC1D3LB9A6J9 549 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 DFFAO00273 331 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 PLK4O00444 970 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 KPNA3O00505 521 aaPredicted RBP11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 BUB1BO60566 1050 aaPredicted RBP11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 MAFKO60675 156 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 PALMO75781 387 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 IPO7O95373 1038 aaKnown RBP11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 SERPINF2P08697 491 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 TBC1D3HP0C7X1 549 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 COMTP21964 271 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 GSDMDP57764 484 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 LMNB2Q03252 620 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 NSUN2Q08J23 767 aaKnown RBP eCLIP11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 CNTN1Q12860 1018 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 RFTN1Q14699 578 aaPredicted RBP11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 PAFAH1B3Q15102 231 aaKnown RBP11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 POM121L1PQ3SYA9 428 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 KIAA0895LQ68EN5 471 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 TBC1D3GQ6DHY5 549 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 TBC1D3CQ6IPX1 549 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 NCEH1Q6PIU2 408 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 ARHGAP36Q6ZRI8 547 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 RABEPKQ7Z6M1 372 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 VSIG1Q86XK7 387 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 RHOT1Q8IXI2 618 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 TBC1D3Q8IZP1 549 aaPredicted RBP11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 C12orf50Q8NA57 414 aaPredicted RBP11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 ARRDC3Q96B67 414 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 FAF2Q96CS3 445 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 RNF157Q96PX1 679 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 ZNF670Q9BS34 389 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 HDAC8Q9BY41 377 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 CPEB1Q9BZB8 566 aaKnown RBP11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 TM6SF2Q9BZW4 377 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 LACRTQ9GZZ8 138 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 RXFP3Q9NSD7 469 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 UBA2Q9UBT2 640 aaPredicted RBP11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 EIF2B4Q9UI10 523 aaKnown RBP11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 SLC6A14Q9UN76 642 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 RALGAPA1Q6GYQ0 2036 aa11.33□□□□□ -0.6
SCARNA20-201ENST00000516768 FAM47DPA6NHR8 397 aa11.32□□□□□ -0.6
SCARNA20-201ENST00000516768 MEI4A8MW99 385 aa11.32□□□□□ -0.6
SCARNA20-201ENST00000516768 GOLGA6L6A8MZA4 724 aa11.32□□□□□ -0.6
SCARNA20-201ENST00000516768 KRIT1O00522 736 aa11.32□□□□□ -0.6
SCARNA20-201ENST00000516768 PJA2O43164 708 aa11.32□□□□□ -0.6
SCARNA20-201ENST00000516768 PLRG1O43660 514 aaKnown RBP11.32□□□□□ -0.6
SCARNA20-201ENST00000516768 GDF9O60383 454 aa11.32□□□□□ -0.6
SCARNA20-201ENST00000516768 FSBPO95073 299 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms