RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 TFDP3Q5H9I0 405 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 FFAR4Q5NUL3 377 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 KPRPQ5T749 579 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 RSBN1Q5VWQ0 802 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 KRT79Q5XKE5 535 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 HEPHL1Q6MZM0 1159 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 PWWP2BQ6NUJ5 590 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 MIGA2Q7L4E1 593 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 ABI3BPQ7Z7G0 1075 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 PPP1R3BQ86XI6 285 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 SUMF1Q8NBK3 374 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 CMASQ8NFW8 434 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 CEP76Q8TAP6 659 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 SLC35F5Q8WV83 523 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 TANKQ92844 425 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 RBMXL1Q96E39 390 aaKnown RBP-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 TMEM19Q96HH6 336 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 ST6GAL2Q96JF0 529 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 C3orf30Q96M34 536 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 TRAPPC9Q96Q05 1148 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 MAP3K14Q99558 947 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 TP63Q9H3D4 680 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 SLC4A4Q9Y6R1 1079 aa-0.7□□□□□ -2.52
RNU6-539P-201ENST00000516665 MEX3AA1L020 520 aaKnown RBP-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 LRRC14BA6NHZ5 514 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 TTC34A8MYJ7 566 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 MID1O15344 667 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 AIREO43918 545 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 GPRIN2O60269 458 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 FKBP9O95302 570 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 FGRP09769 529 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 DUSP1P28562 367 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 RBMS1P29558 406 aaKnown RBP-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 IL15P40933 162 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 ZFP36L2P47974 494 aaKnown RBP-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 MTNR1BP49286 362 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 PAX8Q06710 450 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 C3orf36Q3SXR2 165 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 IRAK1BP1Q5VVH5 260 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 RBMS3Q6XE24 437 aaKnown RBP-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 KCTD8Q6ZWB6 473 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 FKBP9P1Q75LS8 142 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 SND1Q7KZF4 910 aaKnown RBP eCLIP-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 CEACAM19Q7Z692 300 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 SLC47A2Q86VL8 602 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 PALB2Q86YC2 1186 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 HERC6Q8IVU3 1022 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 SPARTQ8N0X7 666 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 HORMAD2Q8N7B1 307 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 TEX45Q8NA69 505 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 KCNH5Q8NCM2 988 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 CLRN3Q8NCR9 226 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 PRSS33Q8NF86 280 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 TMEM163Q8TC26 289 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 LMBR1Q8WVP7 490 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 ASB12Q8WXK4 309 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 BADQ92934 168 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 ZDHHC12Q96GR4 267 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 REXO5Q96IC2 774 aaKnown RBP-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 VPS50Q96JG6 964 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 GFM1Q96RP9 751 aaKnown RBP-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 MXD3Q9BW11 206 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 TRIM5Q9C035 493 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 GNB4Q9HAV0 340 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 MKKSQ9NPJ1 570 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 CNNM1Q9NRU3 951 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 FBXO40Q9UH90 709 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 PCDHB2Q9Y5E7 798 aa-0.71□□□□□ -2.52
RNU6-539P-201ENST00000516665 A0A0G2JLW4 131 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 ACOD1A6NK06 481 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 PALM2-AKAP2B1ALY0 433 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 FAM227AF5H4B4 570 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 SOCS3O14543 225 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 PHGDHO43175 533 aaKnown RBP-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 SRGAP2O75044 1071 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 UGT1A4P22310 534 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 IL4RP24394 825 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 PMELP40967 661 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 AGTR2P50052 363 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 UCP3P55916 312 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 EIF4A1P60842 406 aaKnown RBP-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 RPP30P78346 268 aaKnown RBP-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 SATB1Q01826 763 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 PRB3Q04118 309 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 PLA1AQ53H76 456 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 CCDC157Q569K6 752 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 XKR3Q5GH77 459 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 KIAA0907Q7Z7F0 614 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 ADCK1Q86TW2 530 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 ODF3L1Q8IXM7 274 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 PPM1NQ8N819 430 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 DDX51Q8N8A6 666 aaKnown RBP eCLIP-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 NSUN6Q8TEA1 469 aaKnown RBP-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 ZFAND2BQ8WV99 257 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 GPR78Q96P69 363 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 TBX15Q96SF7 602 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 LRRC1Q9BTT6 524 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 TRIM2Q9C040 744 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 WNT5BQ9H1J7 359 aa-0.72□□□□□ -2.52
RNU6-539P-201ENST00000516665 MYNNQ9NPC7 610 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms