RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 TMEM177Q53S58 311 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 EFHC1Q5JVL4 640 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 BRMS1LQ5PSV4 323 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ATAT1Q5SQI0 421 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CYP4A22Q5TCH4 519 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NAA35Q5VZE5 725 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 BTBD8Q5XKL5 378 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PLEKHA7Q6IQ23 1121 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ACAD10Q6JQN1 1059 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CES5AQ6NT32 575 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DENND1BQ6P3S1 775 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PKN3Q6P5Z2 889 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ALKBH5Q6P6C2 394 aaKnown RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZC3H14Q6PJT7 736 aaKnown RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 H2AFVQ71UI9 128 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GAREM2Q75VX8 874 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PDZD4Q76G19 769 aaPredicted RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 STRADAQ7RTN6 431 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 OTOP3Q7RTS5 596 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GPRIN1Q7Z2K8 1008 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DNAJB7Q7Z6W7 309 aaPredicted RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZNF605Q86T29 641 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TMEM150AQ86TG1 271 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RBM23Q86U06 439 aaKnown RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ERICH1Q86X53 443 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZSWIM9Q86XI8 627 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 VSIG1Q86XK7 387 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DDX42Q86XP3 938 aaKnown RBP eCLIP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 XYLT1Q86Y38 959 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PTRH1Q86Y79 214 aaKnown RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PALB2Q86YC2 1186 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DCP2Q8IU60 420 aaKnown RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 WFDC3Q8IUB2 231 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PSTKQ8IV42 348 aaKnown RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PASD1Q8IV76 773 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SCN4BQ8IWT1 228 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 LRRC8AQ8IWT6 810 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TRIM48Q8IWZ4 208 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RHOT2Q8IXI1 618 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MCOLN2Q8IZK6 566 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NLGN4XQ8N0W4 816 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SIX6OS1Q8N1H7 587 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NIPA2Q8N8Q9 360 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 STKLD1Q8NE28 680 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 OR2W6PQ8NHA6 318 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 WDR48Q8TAF3 677 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SLC20A1Q8WUM9 679 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DEPDC1BQ8WUY9 529 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ATXN2LQ8WWM7 1075 aaKnown RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CTNNBL1Q8WYA6 563 aaPredicted RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RFFLQ8WZ73 363 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SEC14L1Q92503 715 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SMG7Q92540 1137 aaKnown RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MRPS31Q92665 395 aaKnown RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SECISBP2LQ93073 1101 aaKnown RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FBXO32Q969P5 355 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NT5C3BQ969T7 300 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NTAN1Q96AB6 310 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 E2F7Q96AV8 911 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 C18orf8Q96DM3 657 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PPP1R13BQ96KQ4 1090 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CCDC42Q96M95 316 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZNF512Q96ME7 567 aaPredicted RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RIPOR3Q96MK2 946 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SERPINB11Q96P15 392 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SLC2A13Q96QE2 648 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GCNAQ96QF7 691 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DIRC2Q96SL1 478 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CPXM1Q96SM3 734 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KCNK16Q96T55 309 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PCDHB18PQ96TA0 734 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TTC1Q99614 292 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CHP1Q99653 195 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 BAG1Q99933 345 aaPredicted RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MED10Q9BTT4 135 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DDX23Q9BUQ8 820 aaKnown RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PHF7Q9BWX1 381 aaPredicted RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ULBP1Q9BZM6 244 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TSGA10Q9BZW7 698 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 S1PR5Q9H228 398 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PDCL3Q9H2J4 239 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SMOC2Q9H3U7 446 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DEF6Q9H4E7 631 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NHEJ1Q9H9Q4 299 aaPredicted RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NMUR1Q9HB89 426 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TRPV4Q9HBA0 871 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 POPDC2Q9HBU9 364 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 LRRC4Q9HBW1 653 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MRPL47Q9HD33 250 aaKnown RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SLC6A20Q9NP91 592 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PCDH12Q9NPG4 1184 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ACP6Q9NPH0 428 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TLR8Q9NR97 1041 aaKnown RBP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KCND1Q9NSA2 647 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ABCC13Q9NSE7 274 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RIC8BQ9NVN3 520 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 C19orf73Q9NVV2 129 aa2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.28□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TRPM5Q9NZQ8 1165 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms