RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 LSP1P33241 339 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 OXCT1P55809 520 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 CYP4F8P98187 520 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 GUCY1A3Q02108 690 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 ALG1LQ6GMV1 187 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 POTEHQ6S545 545 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 SPATA31D4Q6ZUB0 917 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 CTAGE3PQ8IX95 158 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.14□□□□□ -0.475e-14■■■■□ 23.5
LMNA-224ENST00000515711 MICAL1Q8TDZ2 1067 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 ARNTL2Q8WYA1 636 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 IMP4Q96G21 291 aaKnown RBP12.14□□□□□ -0.47
LMNA-224ENST00000515711 TGS1Q96RS0 853 aaKnown RBP12.14□□□□□ -0.47
LMNA-224ENST00000515711 CORO1BQ9BR76 489 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 C17orf80Q9BSJ5 609 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 POLR1EQ9GZS1 481 aaKnown RBP12.14□□□□□ -0.47
LMNA-224ENST00000515711 NKX2-4Q9H2Z4 354 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 ATXN3LQ9H3M9 355 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 TRABDQ9H4I3 376 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 PDFQ9HBH1 243 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 NT5MQ9NPB1 228 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 MAN1C1Q9NR34 630 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 GKN1Q9NS71 199 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 INTS9Q9NV88 658 aaKnown RBP12.14□□□□□ -0.47
LMNA-224ENST00000515711 ZDHHC7Q9NXF8 308 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 MOCS1Q9NZB8 636 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 SEPT3Q9UH03 358 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 ARHGAP26Q9UNA1 814 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 TMEM120BA0PK00 339 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 FAM47DPA6NHR8 397 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 HIDE1A8MVS5 230 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 J3KR12 359 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 KDELR3O43731 214 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 FAM155BO75949 473 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 KRT38O76015 456 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 LUC7L3O95232 432 aaKnown RBP12.13□□□□□ -0.47
LMNA-224ENST00000515711 C1QAP02745 245 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 MYL4P12829 197 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 PTPN2P17706 415 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 PAMP19021 973 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 CES1P23141 567 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 HOXD9P28356 352 aaPredicted RBP12.13□□□□□ -0.47
LMNA-224ENST00000515711 ADRA1AP35348 466 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 RPS24P62847 133 aaKnown RBP12.13□□□□□ -0.47
LMNA-224ENST00000515711 MGAT5Q09328 741 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 NIPAL4Q0D2K0 466 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 DNAJC3Q13217 504 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 LAMB3Q13751 1172 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 SPARCL1Q14515 664 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 PCID2Q5JVF3 399 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 MPP7Q5T2T1 576 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 TXNDC8Q6A555 127 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 IL31Q6EBC2 164 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 HTR3DQ70Z44 454 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 OTOP3Q7RTS5 596 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 TMEM135Q86UB9 458 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 HS6ST3Q8IZP7 471 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 CYP4X1Q8N118 509 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 CFAP52Q8N1V2 620 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 PPM1NQ8N819 430 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 PPHLN1Q8NEY8 458 aaKnown RBP12.13□□□□□ -0.47
LMNA-224ENST00000515711 IPMKQ8NFU5 416 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 GABPB2Q8TAK5 448 aaPredicted RBP12.13□□□□□ -0.47
LMNA-224ENST00000515711 MYEOVQ96EZ4 313 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 CERS2Q96G23 380 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 FICDQ9BVA6 458 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 PRKD2Q9BZL6 878 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 CCDC134Q9H6E4 229 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 PLAC1Q9HBJ0 212 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 KCNK9Q9NPC2 374 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 CD320Q9NPF0 282 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 SMPD4Q9NXE4 827 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 NSMCE4AQ9NXX6 385 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 UBA2Q9UBT2 640 aaPredicted RBP12.13□□□□□ -0.47
LMNA-224ENST00000515711 RPS6KL1Q9Y6S9 549 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 ANKRD36A6QL64 1941 aa12.13□□□□□ -0.47
LMNA-224ENST00000515711 CXorf51AA0A1B0GTR3 108 aa12.12□□□□□ -0.47
LMNA-224ENST00000515711 A0A1W2PRU2 124 aa12.12□□□□□ -0.47
LMNA-224ENST00000515711 E2F8A0AVK6 867 aa12.12□□□□□ -0.47
LMNA-224ENST00000515711 PRR33A8MZF0 331 aa12.12□□□□□ -0.47
LMNA-224ENST00000515711 GFRA2O00451 464 aa12.12□□□□□ -0.47
LMNA-224ENST00000515711 CCL16O15467 120 aa12.12□□□□□ -0.47
LMNA-224ENST00000515711 TBL1XO60907 577 aa12.12□□□□□ -0.47
LMNA-224ENST00000515711 CLASP2O75122 1294 aaKnown RBP12.12□□□□□ -0.47
LMNA-224ENST00000515711 ZWINTO95229 277 aa12.12□□□□□ -0.47
LMNA-224ENST00000515711 MT-CYBP00156 380 aaPredicted RBP12.12□□□□□ -0.47
LMNA-224ENST00000515711 SNRPAP09012 282 aaKnown RBP12.12□□□□□ -0.47
LMNA-224ENST00000515711 DNAJB1P25685 340 aa12.12□□□□□ -0.47
LMNA-224ENST00000515711 ACVRL1P37023 503 aa12.12□□□□□ -0.47
LMNA-224ENST00000515711 WNT3AP56704 352 aa12.12□□□□□ -0.47
LMNA-224ENST00000515711 ERVK-21P61565 698 aa12.12□□□□□ -0.47
LMNA-224ENST00000515711 SLC10A7Q0GE19 358 aa12.12□□□□□ -0.47
LMNA-224ENST00000515711 KDELC1Q6UW63 502 aa12.12□□□□□ -0.47
LMNA-224ENST00000515711 ZNF771Q7L3S4 317 aaPredicted RBP12.12□□□□□ -0.47
LMNA-224ENST00000515711 METTL3Q86U44 580 aaKnown RBP12.12□□□□□ -0.47
LMNA-224ENST00000515711 PRPF39Q86UA1 669 aaKnown RBP12.12□□□□□ -0.47
LMNA-224ENST00000515711 RASSF3Q86WH2 238 aa12.12□□□□□ -0.47
LMNA-224ENST00000515711 MAB21L3Q8N8X9 362 aa12.12□□□□□ -0.47
LMNA-224ENST00000515711 ZNF557Q8N988 423 aaPredicted RBP12.12□□□□□ -0.47
LMNA-224ENST00000515711 SPATA22Q8NHS9 363 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms