RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 EEF1A2Q05639 463 aaKnown RBP4.17□□□□□ -1.74
LINC01088-211ENST00000515597 MORC3Q14149 939 aa4.17□□□□□ -1.74
LINC01088-211ENST00000515597 HNF4GQ14541 408 aa4.17□□□□□ -1.74
LINC01088-211ENST00000515597 ZNF284Q2VY69 593 aa4.17□□□□□ -1.74
LINC01088-211ENST00000515597 ZNF718Q3SXZ3 478 aa4.17□□□□□ -1.74
LINC01088-211ENST00000515597 LRRC24Q50LG9 513 aa4.17□□□□□ -1.74
LINC01088-211ENST00000515597 TDRD12Q587J7 1177 aaKnown RBP4.17□□□□□ -1.74
LINC01088-211ENST00000515597 SPSB3Q6PJ21 355 aa4.17□□□□□ -1.74
LINC01088-211ENST00000515597 RASGRP2Q7LDG7 609 aa4.17□□□□□ -1.74
LINC01088-211ENST00000515597 WDR5BQ86VZ2 330 aa4.17□□□□□ -1.74
LINC01088-211ENST00000515597 FSIP1Q8NA03 581 aa4.17□□□□□ -1.74
LINC01088-211ENST00000515597 OR6Y1Q8NGX8 325 aa4.17□□□□□ -1.74
LINC01088-211ENST00000515597 CEP76Q8TAP6 659 aa4.17□□□□□ -1.74
LINC01088-211ENST00000515597 SLC35F5Q8WV83 523 aa4.17□□□□□ -1.74
LINC01088-211ENST00000515597 TEFMQ96QE5 360 aaKnown RBP4.17□□□□□ -1.74
LINC01088-211ENST00000515597 IL36RNQ9UBH0 155 aa4.17□□□□□ -1.74
LINC01088-211ENST00000515597 SEL1LQ9UBV2 794 aa4.17□□□□□ -1.74
LINC01088-211ENST00000515597 CDH22Q9UJ99 828 aa4.17□□□□□ -1.74
LINC01088-211ENST00000515597 DAAM1Q9Y4D1 1078 aa4.17□□□□□ -1.74
LINC01088-211ENST00000515597 NOTCH3Q9UM47 2321 aa4.17□□□□□ -1.74
LINC01088-211ENST00000515597 PLSCR5A0PG75 271 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 DENND3A2RUS2 1198 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 SRRM3A6NNA2 597 aaPredicted RBP4.16□□□□□ -1.74
LINC01088-211ENST00000515597 C17orf100A8MU93 164 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 F5H423 210 aaPredicted RBP4.16□□□□□ -1.74
LINC01088-211ENST00000515597 NTN3O00634 580 aaPredicted RBP4.16□□□□□ -1.74
LINC01088-211ENST00000515597 ENO3P13929 434 aaPredicted RBP4.16□□□□□ -1.74
LINC01088-211ENST00000515597 PNPLA4P41247 253 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 RHBDL3P58872 404 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 TRAF2Q12933 501 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 PDCLQ13371 301 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 BIRC2Q13490 618 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 KRTAP24-1Q3LI83 254 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 CCDC38Q502W7 563 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 TMEM268Q5VZI3 342 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 SYT13Q7L8C5 426 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 SERPINA11Q86U17 422 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 TRIM74Q86UV6 250 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 TRIM73Q86UV7 250 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 BRSK2Q8IWQ3 736 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 SPICE1Q8N0Z3 855 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 CLIP4Q8N3C7 705 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 SCAIQ8N9R8 606 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 TEX45Q8NA69 505 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 POF1BQ8WVV4 589 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 C1QTNF4Q9BXJ3 329 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 RETREG1Q9H6L5 497 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 PLEKHA2Q9HB19 425 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 THAP1Q9NVV9 213 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 SRP68Q9UHB9 627 aaKnown RBP4.16□□□□□ -1.74
LINC01088-211ENST00000515597 COMMD10Q9Y6G5 202 aa4.16□□□□□ -1.74
LINC01088-211ENST00000515597 E7EVH7 732 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 SYN3O14994 580 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 SEPT4O43236 478 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 CLDN7O95471 211 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 MMP3P08254 477 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 VEGFAP15692 232 aaPredicted RBP4.15□□□□□ -1.75
LINC01088-211ENST00000515597 ZNF12P17014 697 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 TCEA1P23193 301 aaKnown RBP4.15□□□□□ -1.75
LINC01088-211ENST00000515597 THPOP40225 353 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 AMTP48728 403 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 MVDP53602 400 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 CDH12P55289 794 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 SEC61A1P61619 476 aaKnown RBP4.15□□□□□ -1.75
LINC01088-211ENST00000515597 THOC5Q13769 683 aaKnown RBP4.15□□□□□ -1.75
LINC01088-211ENST00000515597 TBC1D9BQ66K14 1250 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 FBXL22Q6P050 247 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 SYNE3Q6ZMZ3 975 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 FJX1Q86VR8 437 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 ENAHQ8N8S7 591 aaPredicted RBP4.15□□□□□ -1.75
LINC01088-211ENST00000515597 TMEM255BQ8WV15 326 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 TMED6Q8WW62 240 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 KTI12Q96EK9 354 aaPredicted RBP4.15□□□□□ -1.75
LINC01088-211ENST00000515597 LTV1Q96GA3 475 aaPredicted RBP4.15□□□□□ -1.75
LINC01088-211ENST00000515597 HERC2P3Q9BVR0 1158 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 ACAD9Q9H845 621 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 GRHL1Q9NZI5 618 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 GRHPRQ9UBQ7 328 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 FBXO40Q9UH90 709 aa4.15□□□□□ -1.75
LINC01088-211ENST00000515597 SRPRBQ9Y5M8 271 aaKnown RBP4.15□□□□□ -1.75
LINC01088-211ENST00000515597 HMX3A6NHT5 357 aa4.14□□□□□ -1.75
LINC01088-211ENST00000515597 ASAP2O43150 1006 aa4.14□□□□□ -1.75
LINC01088-211ENST00000515597 KIF1CO43896 1103 aaKnown RBP4.14□□□□□ -1.75
LINC01088-211ENST00000515597 FAM155BO75949 473 aa4.14□□□□□ -1.75
LINC01088-211ENST00000515597 METTL18O95568 372 aa4.14□□□□□ -1.75
LINC01088-211ENST00000515597 CSF1P09603 554 aa4.14□□□□□ -1.75
LINC01088-211ENST00000515597 NUDT6P53370 316 aa4.14□□□□□ -1.75
LINC01088-211ENST00000515597 PRKAA2P54646 552 aa4.14□□□□□ -1.75
LINC01088-211ENST00000515597 CHAF1AQ13111 956 aaPredicted RBP4.14□□□□□ -1.75
LINC01088-211ENST00000515597 PLCB4Q15147 1175 aa4.14□□□□□ -1.75
LINC01088-211ENST00000515597 H1FNTQ75WM6 255 aaPredicted RBP4.14□□□□□ -1.75
LINC01088-211ENST00000515597 TMC8Q8IU68 726 aa4.14□□□□□ -1.75
LINC01088-211ENST00000515597 VPS37AQ8NEZ2 397 aa4.14□□□□□ -1.75
LINC01088-211ENST00000515597 SDCCAG3Q96C92 435 aa4.14□□□□□ -1.75
LINC01088-211ENST00000515597 RTP4Q96DX8 246 aa4.14□□□□□ -1.75
LINC01088-211ENST00000515597 RPS6KC1Q96S38 1066 aa4.14□□□□□ -1.75
LINC01088-211ENST00000515597 TWSG1Q9GZX9 223 aa4.14□□□□□ -1.75
LINC01088-211ENST00000515597 TAF1DQ9H5J8 278 aaPredicted RBP4.14□□□□□ -1.75
LINC01088-211ENST00000515597 TAGLN3Q9UI15 199 aa4.14□□□□□ -1.75
LINC01088-211ENST00000515597 MYO15BQ96JP2 1530 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms