RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 BUB1O43683 1085 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 LEFTY1O75610 366 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 TMCC1O94876 653 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 PRNPP04156 253 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 SYPP08247 313 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 RARAP10276 462 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 ERCC2P18074 760 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 GKP32189 559 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 RECQLP46063 649 aaPredicted RBP16.03■□□□□ 0.16
SERF1B-208ENST00000515588 CSNK1EP49674 416 aaKnown RBP16.03■□□□□ 0.16
SERF1B-208ENST00000515588 CCR5P51681 352 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 GEMIN4P57678 1058 aaKnown RBP16.03■□□□□ 0.16
SERF1B-208ENST00000515588 DPYSQ14117 519 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 DPYSL2Q16555 572 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 BOLA3Q53S33 107 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 AFMIDQ63HM1 303 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 ZNF354CQ86Y25 554 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 PLPP6Q8IY26 295 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 MINDY1Q8N5J2 469 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 NPWQ8N729 165 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 ZNF564Q8TBZ8 553 aaPredicted RBP16.03■□□□□ 0.16
SERF1B-208ENST00000515588 HEPHQ9BQS7 1158 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 SLC39A8Q9C0K1 460 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 ZWILCHQ9H900 591 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 NHEJ1Q9H9Q4 299 aaPredicted RBP16.03■□□□□ 0.16
SERF1B-208ENST00000515588 OSGEPQ9NPF4 335 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 SPTLC3Q9NUV7 552 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 ZNHIT6Q9NWK9 470 aaKnown RBP16.03■□□□□ 0.16
SERF1B-208ENST00000515588 MFHAS1Q9Y4C4 1052 aa16.03■□□□□ 0.16
SERF1B-208ENST00000515588 TBC1D3DA0A087WVF3 549 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 TBC1D3IA0A087WXS9 549 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 TBC1D3EA0A087X179 549 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 TBC1D3KA0A087X1G2 549 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 TBC1D3FA6NER0 549 aaPredicted RBP16.02■□□□□ 0.16
SERF1B-208ENST00000515588 TBC1D3LB9A6J9 549 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 AKR1B15C9JRZ8 316 aaPredicted RBP16.02■□□□□ 0.16
SERF1B-208ENST00000515588 J3KR12 359 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 MYO1FO00160 1098 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 WNT9AO14904 365 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 LATO43561 262 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 AKR1B10O60218 316 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 GJB3O75712 270 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 TPM1P09493 284 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 TBC1D3HP0C7X1 549 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 HCAR3P49019 387 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 AFF3P51826 1226 aaKnown RBP16.02■□□□□ 0.16
SERF1B-208ENST00000515588 NDST2P52849 883 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 ATXN3P54252 364 aaPredicted RBP16.02■□□□□ 0.16
SERF1B-208ENST00000515588 TSR1Q2NL82 804 aaKnown RBP16.02■□□□□ 0.16
SERF1B-208ENST00000515588 PPM1JQ5JR12 505 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 ATXN7L2Q5T6C5 722 aaPredicted RBP16.02■□□□□ 0.16
SERF1B-208ENST00000515588 TBC1D3GQ6DHY5 549 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 TBC1D3CQ6IPX1 549 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 ARHGAP12Q8IWW6 846 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 TBC1D3Q8IZP1 549 aaPredicted RBP16.02■□□□□ 0.16
SERF1B-208ENST00000515588 OR6K2Q8NGY2 324 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 HSPH1Q92598 858 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 SLC6A18Q96N87 628 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 KDM4CQ9H3R0 1056 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 DEF6Q9H4E7 631 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 PDFQ9HBH1 243 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.02■□□□□ 0.16
SERF1B-208ENST00000515588 DNAAF2Q9NVR5 837 aaKnown RBP16.02■□□□□ 0.16
SERF1B-208ENST00000515588 CTTNBP2NLQ9P2B4 639 aa16.02■□□□□ 0.16
SERF1B-208ENST00000515588 ZSCAN5CA6NGD5 496 aaPredicted RBP16.01■□□□□ 0.15
SERF1B-208ENST00000515588 DAPK3O43293 454 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 GSRP00390 522 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 H2AFZP0C0S5 128 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 PAPOLAP51003 745 aaKnown RBP16.01■□□□□ 0.15
SERF1B-208ENST00000515588 CYTH1Q15438 398 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 KIF19Q2TAC6 998 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 INO80DQ53TQ3 878 aaPredicted RBP16.01■□□□□ 0.15
SERF1B-208ENST00000515588 H2AFVQ71UI9 128 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 ERN2Q76MJ5 926 aaKnown RBP16.01■□□□□ 0.15
SERF1B-208ENST00000515588 POLNQ7Z5Q5 900 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 CNGA4Q8IV77 575 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 TP53INP2Q8IXH6 220 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 TC2NQ8N9U0 490 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 OR2AP1Q8NGE2 309 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 TEKT4Q8WW24 435 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 CTNNBL1Q8WYA6 563 aaPredicted RBP16.01■□□□□ 0.15
SERF1B-208ENST00000515588 HDAC8Q9BY41 377 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 ZDHHC5Q9C0B5 715 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 ZDHHC6Q9H6R6 413 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 IL21RQ9HBE5 538 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 PCDH18Q9HCL0 1135 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 ETNK2Q9NVF9 386 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 DONSONQ9NYP3 566 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 UVRAGQ9P2Y5 699 aa16.01■□□□□ 0.15
SERF1B-208ENST00000515588 H3BRJ5 948 aa16■□□□□ 0.15
SERF1B-208ENST00000515588 GIPC1O14908 333 aa16■□□□□ 0.15
SERF1B-208ENST00000515588 PRAMEF11O60813 436 aa16■□□□□ 0.15
SERF1B-208ENST00000515588 KCNK5O95279 499 aa16■□□□□ 0.15
SERF1B-208ENST00000515588 WNT1P04628 370 aa16■□□□□ 0.15
SERF1B-208ENST00000515588 TMEM253P0C7T8 217 aa16■□□□□ 0.15
SERF1B-208ENST00000515588 CD59P13987 128 aa16■□□□□ 0.15
SERF1B-208ENST00000515588 AMPD1P23109 780 aa16■□□□□ 0.15
SERF1B-208ENST00000515588 IL4RP24394 825 aa16■□□□□ 0.15
SERF1B-208ENST00000515588 ITGB7P26010 798 aa16■□□□□ 0.15
SERF1B-208ENST00000515588 MAT2AP31153 395 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms