RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 SYNCRIPO60506 623 aaKnown RBP11.51□□□□□ -0.57
HTT-213ENST00000513806 PIGNO95427 931 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 RBP3P10745 1247 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 ETS1P14921 441 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 GABRG2P18507 467 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 NDUFV2P19404 249 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 MX2P20592 715 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 CCNCP24863 283 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 MSNP26038 577 aaKnown RBP11.51□□□□□ -0.57
HTT-213ENST00000513806 NNMTP40261 264 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 MMP13P45452 471 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 KCNJ1P48048 391 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 CXCL12P48061 93 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 PSMD8P48556 350 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 NR2C2P49116 596 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 CCNHP51946 323 aaPredicted RBP11.51□□□□□ -0.57
HTT-213ENST00000513806 GDF10P55107 478 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 CSTF1Q05048 431 aaKnown RBP11.51□□□□□ -0.57
HTT-213ENST00000513806 ITKQ08881 620 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 CAMK2GQ13555 558 aaPredicted RBP11.51□□□□□ -0.57
HTT-213ENST00000513806 ZNF235Q14590 738 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 IHHQ14623 411 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 PDK1Q15118 436 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 ARSIQ5FYB1 569 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 TMCO4Q5TGY1 634 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 PAPD7Q5XG87 772 aaKnown RBP11.51□□□□□ -0.57
HTT-213ENST00000513806 DARS2Q6PI48 645 aaKnown RBP11.51□□□□□ -0.57
HTT-213ENST00000513806 KIAA1324Q6UXG2 1013 aaKnown RBP11.51□□□□□ -0.57
HTT-213ENST00000513806 TRMT11Q7Z4G4 463 aaKnown RBP11.51□□□□□ -0.57
HTT-213ENST00000513806 PGBD3Q8N328 593 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 RASGEF1CQ8N431 466 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 TAB3Q8N5C8 712 aaPredicted RBP11.51□□□□□ -0.57
HTT-213ENST00000513806 FRMD1Q8N878 549 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 MDGA1Q8NFP4 955 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 TSTD1Q8NFU3 115 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 OR2A12Q8NGT7 310 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 TFB1MQ8WVM0 346 aaKnown RBP11.51□□□□□ -0.57
HTT-213ENST00000513806 MAML1Q92585 1016 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 VOPP1Q96AW1 172 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 PBKQ96KB5 322 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 AGAP3Q96P47 875 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 TSGA13Q96PP4 275 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 FAM129BQ96TA1 746 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 ZDHHC6Q9H6R6 413 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 RBM22Q9NW64 420 aaKnown RBP eCLIP11.51□□□□□ -0.57
HTT-213ENST00000513806 HECAQ9UBI9 543 aaPredicted RBP11.51□□□□□ -0.57
HTT-213ENST00000513806 SUN2Q9UH99 717 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 EFR3BQ9Y2G0 817 aa11.51□□□□□ -0.57
HTT-213ENST00000513806 ZSCAN5CA6NGD5 496 aaPredicted RBP11.5□□□□□ -0.57
HTT-213ENST00000513806 KRIT1O00522 736 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 MCF2LO15068 1137 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 MID1O15344 667 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 KCNN4O15554 427 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 ATG13O75143 517 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 CCNB1P14635 433 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 PTPN3P26045 913 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 FNTBP49356 437 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 RPS14P62263 151 aaKnown RBP11.5□□□□□ -0.57
HTT-213ENST00000513806 DSC2Q02487 901 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 SLC20A2Q08357 652 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 NIPAL4Q0D2K0 466 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 WASHC5Q12768 1159 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 STARD3Q14849 445 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 SLC45A4Q5BKX6 768 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 CARD16Q5EG05 197 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 LRRC73Q5JTD7 316 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 MARC1Q5VT66 337 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 ZSCAN30Q86W11 494 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 TMPRSS6Q8IU80 811 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 C1orf210Q8IVY1 113 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 PCDH20Q8N6Y1 951 aaKnown RBP11.5□□□□□ -0.57
HTT-213ENST00000513806 CNTD1Q8N815 330 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 KCNV2Q8TDN2 545 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 RLN3Q8WXF3 142 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 TMEM121Q9BTD3 319 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 BCCIPQ9P287 314 aaKnown RBP eCLIP11.5□□□□□ -0.57
HTT-213ENST00000513806 SERGEFQ9UGK8 458 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 WASF2Q9Y6W5 498 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 PLXND1Q9Y4D7 1925 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 FANCMQ8IYD8 2048 aa11.5□□□□□ -0.57
HTT-213ENST00000513806 NPC1O15118 1278 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 ZBTB24O43167 697 aaPredicted RBP11.49□□□□□ -0.57
HTT-213ENST00000513806 LAMTOR5O43504 91 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 LIASO43766 372 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 LEFTY1O75610 366 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 IL1BP01584 269 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 TDGF1P13385 188 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 ITIH2P19823 946 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 CHRNA3P32297 505 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 CD68P34810 354 aaPredicted RBP11.49□□□□□ -0.57
HTT-213ENST00000513806 VASPP50552 380 aaPredicted RBP11.49□□□□□ -0.57
HTT-213ENST00000513806 SCNN1BP51168 640 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 CCR3P51677 355 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 DGKEP52429 567 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 GEMIN4P57678 1058 aaKnown RBP11.49□□□□□ -0.57
HTT-213ENST00000513806 IFI35P80217 286 aaPredicted RBP11.49□□□□□ -0.57
HTT-213ENST00000513806 SEMG2Q02383 582 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 SRSF5Q13243 272 aaKnown RBP11.49□□□□□ -0.57
HTT-213ENST00000513806 MYLK3Q32MK0 819 aa11.49□□□□□ -0.57
HTT-213ENST00000513806 HSF5Q4G112 596 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms