RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 CPEP16870 476 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 FDXRP22570 491 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 AKAP5P24588 427 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 MGAT1P26572 445 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 GNA11P29992 359 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 HOXC13P31276 330 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 MCM5P33992 734 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 MASP1P48740 699 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 DHPSP49366 369 aaPredicted RBP3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 GZMKP49863 264 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 NEK4P51957 841 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 RNASE9P60153 205 aaKnown RBP3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 PSMC5P62195 406 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 FAM193AP78312 1265 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 MXRA7P84157 204 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 NHLH2Q02577 135 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 CYP4A11Q02928 519 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 PLD1Q13393 1074 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 RUNX3Q13761 415 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 DMC1Q14565 340 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 EPHA7Q15375 998 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 TEAD2Q15562 447 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 NAB2Q15742 525 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 PDCD4Q53EL6 469 aaKnown RBP3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 CDCA2Q69YH5 1023 aaPredicted RBP3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 CASC1Q6TDU7 716 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 TMTC3Q6ZXV5 915 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 ANO5Q75V66 913 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 LPCAT2Q7L5N7 544 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 OTUD6AQ7L8S5 288 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 MIER3Q7Z3K6 550 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 IGSF22Q8N9C0 903 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 RNF149Q8NC42 400 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 OR5M3Q8NGP4 307 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 OLIG1Q8TAK6 271 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 MDM1Q8TC05 714 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 BICD2Q8TD16 824 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 BPIFB1Q8TDL5 484 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 CCDC12Q8WUD4 166 aaPredicted RBP3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 CHAC2Q8WUX2 184 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 CNOT6LQ96LI5 555 aaKnown RBP3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 PAAF1Q9BRP4 392 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 SOX7Q9BT81 388 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 EIF2AQ9BY44 585 aaKnown RBP3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 C22orf23Q9BZE7 217 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 ZMYND12Q9H0C1 365 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 CAAP1Q9H8G2 361 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 KIAA1586Q9HCI6 787 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 C6orf50Q9HD87 102 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 RBM28Q9NW13 759 aaKnown RBP3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 ING3Q9NXR8 418 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 FOXJ2Q9P0K8 574 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 SLC17A6Q9P2U8 582 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 HSFX1Q9UBD0 423 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 PILRBQ9UKJ0 227 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 ZKSCAN5Q9Y2L8 839 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 HES2Q9Y543 173 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 INSL5Q9Y5Q6 135 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 TEX15Q9BXT5 2789 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 KNTC1P50748 2209 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 NUP210Q8TEM1 1887 aaPredicted RBP3.96□□□□□ -1.77
PDLIM5-218ENST00000513341 KIF26AQ9ULI4 1882 aaPredicted RBP3.96□□□□□ -1.77
PDLIM5-218ENST00000513341 TNRC6BQ9UPQ9 1833 aaKnown RBP3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 CYP3A7-CYP3A51PA0A087WV96 503 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 A0A087X0B3 334 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 MSH4O15457 936 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 RRP8O43159 456 aaKnown RBP3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 AP5Z1O43299 807 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 GAS7O60861 476 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 GJB3O75712 270 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 SEC24AO95486 1093 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 ZNF883P0CG24 379 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 CBSLP0DN79 551 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 RBP3P10745 1247 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 MYL4P12829 197 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 ARF4P18085 180 aaPredicted RBP3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 CYP3A7P24462 503 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 CBSP35520 551 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 EIF2S3P41091 472 aaKnown RBP3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 P2RY2P41231 377 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 QARSP47897 775 aaKnown RBP3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 MCM2P49736 904 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 SCNN1BP51168 640 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 OCRLQ01968 901 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 MYBPC3Q14896 1274 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 UGCGQ16739 394 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 UPP1Q16831 310 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 Q4G0T1 1027 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 ARHGAP15Q53QZ3 475 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 TMEM177Q53S58 311 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 JAKMIP3Q5VZ66 844 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 CNNM4Q6P4Q7 775 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 SYNE3Q6ZMZ3 975 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 C4orf19Q8IY42 314 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 MB21D2Q8IYB1 491 aaPredicted RBP3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 MINDY1Q8N5J2 469 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 CHST14Q8NCH0 376 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 TSTD1Q8NFU3 115 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 OR2W6PQ8NHA6 318 aa3.96□□□□□ -1.78
PDLIM5-218ENST00000513341 EXOC6Q8TAG9 804 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms