RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 CADM3Q8N126 398 aa7.5□□□□□ -1.21
CHD1-205ENST00000508756 LSM14AQ8ND56 463 aaKnown RBP7.5□□□□□ -1.21
CHD1-205ENST00000508756 DNAAF1Q8NEP3 725 aa7.5□□□□□ -1.21
CHD1-205ENST00000508756 OR4N2Q8NGD1 307 aa7.5□□□□□ -1.21
CHD1-205ENST00000508756 HSPH1Q92598 858 aa7.5□□□□□ -1.21
CHD1-205ENST00000508756 TAOK3Q9H2K8 898 aa7.5□□□□□ -1.21
CHD1-205ENST00000508756 HSF4Q9ULV5 492 aa7.5□□□□□ -1.21
CHD1-205ENST00000508756 CNPY2Q9Y2B0 182 aa7.5□□□□□ -1.21
CHD1-205ENST00000508756 A0A1B0GVT2 93 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 FAM157AC9JC47 383 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 PER2O15055 1255 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 SPTLC2O15270 562 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 LCATP04180 440 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 CHRM4P08173 479 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 MYZAPP0CAP1 466 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 HOXA11P31270 313 aaPredicted RBP7.49□□□□□ -1.21
CHD1-205ENST00000508756 MAPK9P45984 424 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 ENTPD1P49961 510 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 PGGT1BP53609 377 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 PMS2P54278 862 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 CDH12P55289 794 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 TBL3Q12788 808 aaKnown RBP7.49□□□□□ -1.21
CHD1-205ENST00000508756 TMEM95Q3KNT9 176 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 LVRNQ6Q4G3 990 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 SAMD14Q8IZD0 417 aaPredicted RBP7.49□□□□□ -1.21
CHD1-205ENST00000508756 RAB40AQ8WXH6 277 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 CNOT9Q92600 299 aaKnown RBP7.49□□□□□ -1.21
CHD1-205ENST00000508756 SH3KBP1Q96B97 665 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 SLC32A1Q9H598 525 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 EPHX3Q9H6B9 360 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 CATSPERBQ9H7T0 1116 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 WDR6Q9NNW5 1121 aaKnown RBP7.49□□□□□ -1.21
CHD1-205ENST00000508756 TMEM160Q9NX00 188 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 ALKBH4Q9NXW9 302 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 GGA3Q9NZ52 723 aa7.49□□□□□ -1.21
CHD1-205ENST00000508756 RGS14O43566 566 aa7.48□□□□□ -1.21
CHD1-205ENST00000508756 SLC25A17O43808 307 aa7.48□□□□□ -1.21
CHD1-205ENST00000508756 CDC25AP30304 524 aa7.48□□□□□ -1.21
CHD1-205ENST00000508756 ARSFP54793 590 aa7.48□□□□□ -1.21
CHD1-205ENST00000508756 ZP1P60852 638 aa7.48□□□□□ -1.21
CHD1-205ENST00000508756 TDGQ13569 410 aa7.48□□□□□ -1.21
CHD1-205ENST00000508756 GORABQ5T7V8 394 aa7.48□□□□□ -1.21
CHD1-205ENST00000508756 RASSF8Q8NHQ8 419 aa7.48□□□□□ -1.21
CHD1-205ENST00000508756 MAELQ96JY0 434 aaKnown RBP7.48□□□□□ -1.21
CHD1-205ENST00000508756 CD180Q99467 661 aa7.48□□□□□ -1.21
CHD1-205ENST00000508756 ENTPD7Q9NQZ7 604 aa7.48□□□□□ -1.21
CHD1-205ENST00000508756 RRN3P2A6NIE6 340 aa7.47□□□□□ -1.21
CHD1-205ENST00000508756 INAFM1C9JVW0 142 aa7.47□□□□□ -1.21
CHD1-205ENST00000508756 NCAM2O15394 837 aa7.47□□□□□ -1.21
CHD1-205ENST00000508756 LDB2O43679 373 aa7.47□□□□□ -1.21
CHD1-205ENST00000508756 ENO3P13929 434 aaPredicted RBP7.47□□□□□ -1.21
CHD1-205ENST00000508756 THPOP40225 353 aa7.47□□□□□ -1.21
CHD1-205ENST00000508756 NANOS2P60321 138 aaKnown RBP7.47□□□□□ -1.21
CHD1-205ENST00000508756 SLC18A2Q05940 514 aa7.47□□□□□ -1.21
CHD1-205ENST00000508756 GPS2Q13227 327 aa7.47□□□□□ -1.21
CHD1-205ENST00000508756 ZNF284Q2VY69 593 aa7.47□□□□□ -1.21
CHD1-205ENST00000508756 ZNF367Q7RTV3 350 aa7.47□□□□□ -1.21
CHD1-205ENST00000508756 RFWD2Q8NHY2 731 aa7.47□□□□□ -1.21
CHD1-205ENST00000508756 SLC35F5Q8WV83 523 aa7.47□□□□□ -1.21
CHD1-205ENST00000508756 SF3B5Q9BWJ5 86 aaKnown RBP7.47□□□□□ -1.21
CHD1-205ENST00000508756 RAI2Q9Y5P3 530 aa7.47□□□□□ -1.21
CHD1-205ENST00000508756 PTGDR2Q9Y5Y4 395 aa7.47□□□□□ -1.21
CHD1-205ENST00000508756 MS4A18H0YCH9 400 aa7.46□□□□□ -1.22
CHD1-205ENST00000508756 SPRY3O43610 288 aa7.46□□□□□ -1.22
CHD1-205ENST00000508756 LIASO43766 372 aa7.46□□□□□ -1.22
CHD1-205ENST00000508756 KIF1CO43896 1103 aaKnown RBP7.46□□□□□ -1.22
CHD1-205ENST00000508756 CEP104O60308 925 aa7.46□□□□□ -1.22
CHD1-205ENST00000508756 MMP3P08254 477 aa7.46□□□□□ -1.22
CHD1-205ENST00000508756 ROR2Q01974 943 aaKnown RBP7.46□□□□□ -1.22
CHD1-205ENST00000508756 ATG9BQ674R7 924 aa7.46□□□□□ -1.22
CHD1-205ENST00000508756 ADGRG6Q86SQ4 1221 aa7.46□□□□□ -1.22
CHD1-205ENST00000508756 TMC8Q8IU68 726 aa7.46□□□□□ -1.22
CHD1-205ENST00000508756 ZDHHC17Q8IUH5 632 aa7.46□□□□□ -1.22
CHD1-205ENST00000508756 SMAP1Q8IYB5 467 aaPredicted RBP7.46□□□□□ -1.22
CHD1-205ENST00000508756 B4GALNT2Q8NHY0 566 aa7.46□□□□□ -1.22
CHD1-205ENST00000508756 RUFY2Q8WXA3 655 aa7.46□□□□□ -1.22
CHD1-205ENST00000508756 EYA3Q99504 573 aa7.46□□□□□ -1.22
CHD1-205ENST00000508756 GPR63Q9BZJ6 419 aa7.46□□□□□ -1.22
CHD1-205ENST00000508756 TTYH1Q9H313 450 aaPredicted RBP7.46□□□□□ -1.22
CHD1-205ENST00000508756 ARID4BQ4LE39 1312 aaPredicted RBP7.46□□□□□ -1.22
CHD1-205ENST00000508756 A0A096LPK6 155 aa7.45□□□□□ -1.22
CHD1-205ENST00000508756 KCNAB3O43448 404 aa7.45□□□□□ -1.22
CHD1-205ENST00000508756 CDKN2AP42771 156 aaKnown RBP7.45□□□□□ -1.22
CHD1-205ENST00000508756 THBS3P49746 956 aa7.45□□□□□ -1.22
CHD1-205ENST00000508756 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.45□□□□□ -1.22
CHD1-205ENST00000508756 RAPGEF1Q13905 1077 aa7.45□□□□□ -1.22
CHD1-205ENST00000508756 FNBP1LQ5T0N5 605 aa7.45□□□□□ -1.22
CHD1-205ENST00000508756 OTUD1Q5VV17 481 aaPredicted RBP7.45□□□□□ -1.22
CHD1-205ENST00000508756 RETSATQ6NUM9 610 aa7.45□□□□□ -1.22
CHD1-205ENST00000508756 FAM83HQ6ZRV2 1179 aaPredicted RBP7.45□□□□□ -1.22
CHD1-205ENST00000508756 MON1AQ86VX9 555 aa7.45□□□□□ -1.22
CHD1-205ENST00000508756 CHD1LQ86WJ1 897 aa7.45□□□□□ -1.22
CHD1-205ENST00000508756 PRR26Q8N8Z3 221 aa7.45□□□□□ -1.22
CHD1-205ENST00000508756 GDPD5Q8WTR4 605 aa7.45□□□□□ -1.22
CHD1-205ENST00000508756 USP13Q92995 863 aaPredicted RBP7.45□□□□□ -1.22
CHD1-205ENST00000508756 TMEM18Q96B42 140 aa7.45□□□□□ -1.22
CHD1-205ENST00000508756 ELP4Q96EB1 424 aa7.45□□□□□ -1.22
CHD1-205ENST00000508756 NPFFR1Q9GZQ6 430 aa7.45□□□□□ -1.22
CHD1-205ENST00000508756 MVB12BQ9H7P6 319 aa7.45□□□□□ -1.22
CHD1-205ENST00000508756 PYGLP06737 847 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms