RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 TBC1D3LB9A6J9 549 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 RASA4BC9J798 803 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 H3BRJ5 948 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 RASA4O43374 803 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 BUB1O43683 1085 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 AKR1B10O60218 316 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 DFNA5O60443 496 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 ZNF821O75541 412 aaPredicted RBP20.24■□□□□ 0.83
SFXN1-209ENST00000508290 CTSLP07711 333 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 TBC1D3HP0C7X1 549 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 ITGB7P26010 798 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 DNA2P51530 1060 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 CCNHP51946 323 aaPredicted RBP20.24■□□□□ 0.83
SFXN1-209ENST00000508290 HADHQ16836 314 aaKnown RBP20.24■□□□□ 0.83
SFXN1-209ENST00000508290 PPP6R3Q5H9R7 873 aaPredicted RBP20.24■□□□□ 0.83
SFXN1-209ENST00000508290 TBC1D3GQ6DHY5 549 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 TBC1D3CQ6IPX1 549 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 ERN2Q76MJ5 926 aaKnown RBP20.24■□□□□ 0.83
SFXN1-209ENST00000508290 PRPF39Q86UA1 669 aaKnown RBP20.24■□□□□ 0.83
SFXN1-209ENST00000508290 TBC1D3Q8IZP1 549 aaPredicted RBP20.24■□□□□ 0.83
SFXN1-209ENST00000508290 CCDC42Q96M95 316 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 GDAP1L1Q96MZ0 367 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 PEBP4Q96S96 227 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 TRIM5Q9C035 493 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 TNKS2Q9H2K2 1166 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 NOL6Q9H6R4 1146 aaKnown RBP20.24■□□□□ 0.83
SFXN1-209ENST00000508290 LRRC19Q9H756 370 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 FCF1Q9Y324 198 aaKnown RBP20.24■□□□□ 0.83
SFXN1-209ENST00000508290 POP4O95707 220 aaKnown RBP20.23■□□□□ 0.83
SFXN1-209ENST00000508290 CD160O95971 181 aa20.23■□□□□ 0.83
SFXN1-209ENST00000508290 CEACAM1P13688 526 aa20.23■□□□□ 0.83
SFXN1-209ENST00000508290 NEK3P51956 506 aa20.23■□□□□ 0.83
SFXN1-209ENST00000508290 GRM3Q14832 879 aa20.23■□□□□ 0.83
SFXN1-209ENST00000508290 ASTE1Q2TB18 679 aaPredicted RBP20.23■□□□□ 0.83
SFXN1-209ENST00000508290 UAP1L1Q3KQV9 507 aa20.23■□□□□ 0.83
SFXN1-209ENST00000508290 ARSIQ5FYB1 569 aa20.23■□□□□ 0.83
SFXN1-209ENST00000508290 CYP4V2Q6ZWL3 525 aaPredicted RBP20.23■□□□□ 0.83
SFXN1-209ENST00000508290 ADAT2Q7Z6V5 191 aaKnown RBP20.23■□□□□ 0.83
SFXN1-209ENST00000508290 ZNF564Q8TBZ8 553 aaPredicted RBP20.23■□□□□ 0.83
SFXN1-209ENST00000508290 GRIN3AQ8TCU5 1115 aa20.23■□□□□ 0.83
SFXN1-209ENST00000508290 RAB7BQ96AH8 199 aa20.23■□□□□ 0.83
SFXN1-209ENST00000508290 HMCESQ96FZ2 354 aa20.23■□□□□ 0.83
SFXN1-209ENST00000508290 ORAI3Q9BRQ5 295 aa20.23■□□□□ 0.83
SFXN1-209ENST00000508290 ANP32EQ9BTT0 268 aa20.23■□□□□ 0.83
SFXN1-209ENST00000508290 RCOR3Q9P2K3 495 aaPredicted RBP20.23■□□□□ 0.83
SFXN1-209ENST00000508290 HECAQ9UBI9 543 aaPredicted RBP20.23■□□□□ 0.83
SFXN1-209ENST00000508290 WASF2Q9Y6W5 498 aa20.23■□□□□ 0.83
SFXN1-209ENST00000508290 PCDH15Q96QU1 1955 aa20.23■□□□□ 0.83
SFXN1-209ENST00000508290 AKR1B15C9JRZ8 316 aaPredicted RBP20.22■□□□□ 0.83
SFXN1-209ENST00000508290 VILLO15195 856 aa20.22■□□□□ 0.83
SFXN1-209ENST00000508290 MAGEC1O60732 1142 aa20.22■□□□□ 0.83
SFXN1-209ENST00000508290 RNGTTO60942 597 aaKnown RBP20.22■□□□□ 0.83
SFXN1-209ENST00000508290 LEFTY1O75610 366 aa20.22■□□□□ 0.83
SFXN1-209ENST00000508290 IGSF6O95976 241 aa20.22■□□□□ 0.83
SFXN1-209ENST00000508290 ERCC2P18074 760 aa20.22■□□□□ 0.83
SFXN1-209ENST00000508290 OVGP1Q12889 678 aa20.22■□□□□ 0.83
SFXN1-209ENST00000508290 CA9Q16790 459 aa20.22■□□□□ 0.83
SFXN1-209ENST00000508290 SETMARQ53H47 684 aaPredicted RBP20.22■□□□□ 0.83
SFXN1-209ENST00000508290 PIP5KL1Q5T9C9 394 aa20.22■□□□□ 0.83
SFXN1-209ENST00000508290 TMCO4Q5TGY1 634 aa20.22■□□□□ 0.83
SFXN1-209ENST00000508290 CHST14Q8NCH0 376 aa20.22■□□□□ 0.83
SFXN1-209ENST00000508290 ARHGEF26Q96DR7 871 aa20.22■□□□□ 0.83
SFXN1-209ENST00000508290 KCTD15Q96SI1 283 aaPredicted RBP20.22■□□□□ 0.83
SFXN1-209ENST00000508290 GPATCH2LQ9NWQ4 482 aa20.22■□□□□ 0.83
SFXN1-209ENST00000508290 CTTNBP2NLQ9P2B4 639 aa20.22■□□□□ 0.83
SFXN1-209ENST00000508290 UBA2Q9UBT2 640 aaPredicted RBP20.22■□□□□ 0.83
SFXN1-209ENST00000508290 MFHAS1Q9Y4C4 1052 aa20.22■□□□□ 0.83
SFXN1-209ENST00000508290 DNAH14Q0VDD8 3507 aa20.21■□□□□ 0.83
SFXN1-209ENST00000508290 AP1G1O43747 822 aa20.21■□□□□ 0.83
SFXN1-209ENST00000508290 GJB3O75712 270 aa20.21■□□□□ 0.83
SFXN1-209ENST00000508290 TMCC1O94876 653 aa20.21■□□□□ 0.83
SFXN1-209ENST00000508290 KCNK5O95279 499 aa20.21■□□□□ 0.83
SFXN1-209ENST00000508290 TMEM253P0C7T8 217 aa20.21■□□□□ 0.83
SFXN1-209ENST00000508290 SERPINB6P35237 376 aa20.21■□□□□ 0.83
SFXN1-209ENST00000508290 C21orf59P57076 290 aa20.21■□□□□ 0.83
SFXN1-209ENST00000508290 DPYSQ14117 519 aa20.21■□□□□ 0.83
SFXN1-209ENST00000508290 RFTN1Q14699 578 aaPredicted RBP20.21■□□□□ 0.83
SFXN1-209ENST00000508290 AFMIDQ63HM1 303 aa20.21■□□□□ 0.83
SFXN1-209ENST00000508290 NAPEPLDQ6IQ20 393 aa20.21■□□□□ 0.83
SFXN1-209ENST00000508290 IQCHQ86VS3 1027 aa20.21■□□□□ 0.83
SFXN1-209ENST00000508290 RYBPQ8N488 228 aaPredicted RBP20.21■□□□□ 0.83
SFXN1-209ENST00000508290 TM6SF2Q9BZW4 377 aa20.21■□□□□ 0.83
SFXN1-209ENST00000508290 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.21■□□□□ 0.83
SFXN1-209ENST00000508290 CWC15Q9P013 229 aaKnown RBP20.21■□□□□ 0.83
SFXN1-209ENST00000508290 ANKRD6Q9Y2G4 727 aa20.21■□□□□ 0.83
SFXN1-209ENST00000508290 PCDHGB2Q9Y5G2 931 aa20.21■□□□□ 0.83
SFXN1-209ENST00000508290 PRAMEF11O60813 436 aa20.2■□□□□ 0.82
SFXN1-209ENST00000508290 PROSCO94903 275 aa20.2■□□□□ 0.82
SFXN1-209ENST00000508290 CD38P28907 300 aa20.2■□□□□ 0.82
SFXN1-209ENST00000508290 MAN1A1P33908 653 aa20.2■□□□□ 0.82
SFXN1-209ENST00000508290 CSNK1EP49674 416 aaKnown RBP20.2■□□□□ 0.82
SFXN1-209ENST00000508290 NOVA1P51513 510 aaKnown RBP20.2■□□□□ 0.82
SFXN1-209ENST00000508290 SUOXP51687 545 aa20.2■□□□□ 0.82
SFXN1-209ENST00000508290 METAP1P53582 386 aa20.2■□□□□ 0.82
SFXN1-209ENST00000508290 RHOAP61586 193 aa20.2■□□□□ 0.82
SFXN1-209ENST00000508290 SLC25A11Q02978 314 aaKnown RBP20.2■□□□□ 0.82
SFXN1-209ENST00000508290 TBX2Q13207 712 aaPredicted RBP20.2■□□□□ 0.82
SFXN1-209ENST00000508290 MYLK3Q32MK0 819 aa20.2■□□□□ 0.82
SFXN1-209ENST00000508290 ZNF805Q5CZA5 627 aa20.2■□□□□ 0.82
SFXN1-209ENST00000508290 FBXL19Q6PCT2 694 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 224.1 ms