RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 HDDC3Q8N4P3 179 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 PQLC3Q8N755 202 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 OR6K2Q8NGY2 324 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 TPCN2Q8NHX9 752 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 GANCQ8TET4 914 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 ARRDC3Q96B67 414 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 OMDQ99983 421 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 BTBD1Q9H0C5 482 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 LHX3Q9UBR4 397 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 UBA2Q9UBT2 640 aaPredicted RBP18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 IL36AQ9UHA7 158 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 FZD4Q9ULV1 537 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 ALG6Q9Y672 507 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 GON4LQ3T8J9 2241 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 LRRD1A4D1F6 860 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 BTNL10A8MVZ5 291 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 C10orf142B7Z368 130 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 C1QTNF3-AMACRE9PGA6 284 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 SPOPO43791 374 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 LEFTY1O75610 366 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 SEMA4FO95754 770 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 GSRP00390 522 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 KDELR1P24390 212 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 RECQLP46063 649 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 CNTN1Q12860 1018 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 ARSIQ5FYB1 569 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 AGBL4Q5VU57 503 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 FAM46CQ5VWP2 391 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 PEAR1Q5VY43 1037 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 TCEAL6Q6IPX3 200 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 C11orf63Q6NUN7 778 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 PLPP6Q8IY26 295 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 TMIEQ8NEW7 156 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 CADM4Q8NFZ8 388 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 OR2AP1Q8NGE2 309 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 CASKIN2Q8WXE0 1202 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 PIGKQ92643 395 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 TCEAL3Q969E4 200 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 HEPHQ9BQS7 1158 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 SGK2Q9HBY8 427 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 HECAQ9UBI9 543 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 IPO11Q9UI26 975 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 PILRBQ9UKJ0 227 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 NCKAP1Q9Y2A7 1128 aa18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 FARP1Q9Y4F1 1045 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-216ENST00000506537 PATE3B3GLJ2 98 aa18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 PRNPP04156 253 aa18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 KRT1P04264 644 aa18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 TNNT1P13805 278 aa18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 MARCKSL1P49006 195 aa18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 ADPRHP54922 357 aa18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 RHOAP61586 193 aa18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 PAFAH1B3Q15102 231 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 SF3A2Q15428 464 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 CSRP2Q16527 193 aa18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 PIP5KL1Q5T9C9 394 aa18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 MAP7D3Q8IWC1 876 aa18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 RHOT1Q8IXI2 618 aa18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 KIAA2013Q8IYS2 634 aa18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 FOXJ1Q92949 421 aa18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 EXOC2Q96KP1 924 aa18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 ZDHHC6Q9H6R6 413 aa18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 SP110Q9HB58 689 aa18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 TRIM10Q9UDY6 481 aa18.54■□□□□ 0.56
PDLIM7-216ENST00000506537 GOLGA6L3A6NEY3 463 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 METTL12A8MUP2 240 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 KPNA3O00505 521 aaPredicted RBP18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 PSTPIP1O43586 416 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 PEX11BO96011 259 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 ZNF806P0C7X5 589 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 MAOBP27338 520 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 SERPINB6P35237 376 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 RGRP47804 291 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 IL10RBQ08334 325 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 SFSWAPQ12872 951 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 ZFYVE27Q5T4F4 411 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 DCAF12L1Q5VU92 463 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 NCEH1Q6PIU2 408 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 KIAA1328Q86T90 577 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 SYT12Q8IV01 421 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 GDAP1L1Q96MZ0 367 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 PCED1AQ9H1Q7 454 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 VPS45Q9NRW7 570 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 SLCO1B1Q9Y6L6 691 aa18.53■□□□□ 0.56
PDLIM7-216ENST00000506537 MEI4A8MW99 385 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 ZNF487B1APH4 448 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 INSIG1O15503 277 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 MAFKO60675 156 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 MAP3K6O95382 1288 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 IGSF6O95976 241 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 IGHV4-34P06331 123 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 TAS2R38P59533 333 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 SNRPD1P62314 119 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 MYLK3Q32MK0 819 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 PRR23CQ6ZRP0 262 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 DAAM2Q86T65 1068 aa18.52■□□□□ 0.56
PDLIM7-216ENST00000506537 VSIG1Q86XK7 387 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms