RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 RFC1P35251 1148 aaPredicted RBP4.05□□□□□ -1.76
SMC4-227ENST00000497984 CXCR3P49682 368 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 AK2P54819 239 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 TBX4P57082 545 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 ADORA2A-AS1P86434 159 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 HDAC1Q13547 482 aaPredicted RBP4.05□□□□□ -1.76
SMC4-227ENST00000497984 ALKBH1Q13686 389 aaKnown RBP4.05□□□□□ -1.76
SMC4-227ENST00000497984 GXYLT1Q4G148 440 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 SETMARQ53H47 684 aaPredicted RBP4.05□□□□□ -1.76
SMC4-227ENST00000497984 C9orf139Q6ZV77 190 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 PATL1Q86TB9 770 aaKnown RBP4.05□□□□□ -1.76
SMC4-227ENST00000497984 EXOC3L1Q86VI1 746 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 LMNTD1Q8N9Z9 388 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 STYXQ8WUJ0 223 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 SORCS1Q8WY21 1168 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 PGLYRP2Q96PD5 576 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 MSTO1Q9BUK6 570 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 IFT27Q9BW83 186 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 NPFFR1Q9GZQ6 430 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 LHPPQ9H008 270 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 CLK4Q9HAZ1 481 aaKnown RBP4.05□□□□□ -1.76
SMC4-227ENST00000497984 MALT1Q9UDY8 824 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 KDM4EB2RXH2 506 aaPredicted RBP4.04□□□□□ -1.76
SMC4-227ENST00000497984 XPNPEP2O43895 674 aa4.04□□□□□ -1.76
SMC4-227ENST00000497984 AMD1P17707 334 aa4.04□□□□□ -1.76
SMC4-227ENST00000497984 CRIP2P52943 208 aaPredicted RBP4.04□□□□□ -1.76
SMC4-227ENST00000497984 PICALMQ13492 652 aa4.04□□□□□ -1.76
SMC4-227ENST00000497984 XKR9Q5GH70 373 aa4.04□□□□□ -1.76
SMC4-227ENST00000497984 TMEM268Q5VZI3 342 aa4.04□□□□□ -1.76
SMC4-227ENST00000497984 RHBDF2Q6PJF5 856 aa4.04□□□□□ -1.76
SMC4-227ENST00000497984 KSR2Q6VAB6 950 aa4.04□□□□□ -1.76
SMC4-227ENST00000497984 PGBD5Q8N414 524 aa4.04□□□□□ -1.76
SMC4-227ENST00000497984 KCNJ9Q92806 393 aa4.04□□□□□ -1.76
SMC4-227ENST00000497984 CADM1Q9BY67 442 aaKnown RBP4.04□□□□□ -1.76
SMC4-227ENST00000497984 ABHD16BQ9H3Z7 469 aa4.04□□□□□ -1.76
SMC4-227ENST00000497984 SEPSECSQ9HD40 501 aaKnown RBP4.04□□□□□ -1.76
SMC4-227ENST00000497984 FNIP2Q9P278 1114 aa4.04□□□□□ -1.76
SMC4-227ENST00000497984 UPB1Q9UBR1 384 aa4.04□□□□□ -1.76
SMC4-227ENST00000497984 C17orf100A8MU93 164 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 TNFRSF6BO95407 300 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 CYP21A2P08686 494 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 CKMT1AP12532 417 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 GYS1P13807 737 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 DPP6P42658 865 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 PMS2CLQ68D20 193 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 TYW3Q6IPR3 259 aaKnown RBP4.03□□□□□ -1.76
SMC4-227ENST00000497984 AADACL2Q6P093 401 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 GALNT7Q86SF2 657 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 RFWD2Q8NHY2 731 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 DEPTORQ8TB45 409 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 PARD3BQ8TEW8 1205 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 ARRDC3Q96B67 414 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 SCMH1Q96GD3 660 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 CCDC138Q96M89 665 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 UHRF2Q96PU4 802 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 TEFMQ96QE5 360 aaKnown RBP4.03□□□□□ -1.76
SMC4-227ENST00000497984 PHTF1Q9UMS5 762 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 DAPP1Q9UN19 280 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 NFS1Q9Y697 457 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 SNED1Q8TER0 1413 aa4.03□□□□□ -1.76
SMC4-227ENST00000497984 EFCAB8A8MWE9 144 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 TIMM23O14925 209 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 SERPINB2P05120 415 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 ABCB4P21439 1286 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 AVPR2P30518 371 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 DCTDP32321 178 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 BTKQ06187 659 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 DHX34Q14147 1143 aaKnown RBP4.02□□□□□ -1.77
SMC4-227ENST00000497984 DCTN1Q14203 1278 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 GALNTL6Q49A17 601 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 TTC22Q5TAA0 569 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 TMC8Q8IU68 726 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 ANKRD44Q8N8A2 993 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 SCAIQ8N9R8 606 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 FAM71BQ8TC56 605 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 MYD88Q99836 296 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 C1QTNF5Q9BXJ0 243 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 MMP28Q9H239 520 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 KLQ9UEF7 1012 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 MMP24Q9Y5R2 645 aa4.02□□□□□ -1.77
SMC4-227ENST00000497984 TARSL2A2RTX5 802 aaKnown RBP4.01□□□□□ -1.77
SMC4-227ENST00000497984 CLGNO14967 610 aa4.01□□□□□ -1.77
SMC4-227ENST00000497984 CH25HO95992 272 aa4.01□□□□□ -1.77
SMC4-227ENST00000497984 HMGB1P09429 215 aaKnown RBP4.01□□□□□ -1.77
SMC4-227ENST00000497984 CFC1BP0CG36 223 aa4.01□□□□□ -1.77
SMC4-227ENST00000497984 CFC1P0CG37 223 aa4.01□□□□□ -1.77
SMC4-227ENST00000497984 ANOS1P23352 680 aa4.01□□□□□ -1.77
SMC4-227ENST00000497984 DGKAP23743 735 aa4.01□□□□□ -1.77
SMC4-227ENST00000497984 FMO4P31512 558 aa4.01□□□□□ -1.77
SMC4-227ENST00000497984 PEX5P50542 639 aa4.01□□□□□ -1.77
SMC4-227ENST00000497984 SPARCL1Q14515 664 aa4.01□□□□□ -1.77
SMC4-227ENST00000497984 RBBP5Q15291 538 aaKnown RBP4.01□□□□□ -1.77
SMC4-227ENST00000497984 NFRKBQ6P4R8 1299 aa4.01□□□□□ -1.77
SMC4-227ENST00000497984 NEK9Q8TD19 979 aa4.01□□□□□ -1.77
SMC4-227ENST00000497984 PIGSQ96S52 555 aa4.01□□□□□ -1.77
SMC4-227ENST00000497984 EPYCQ99645 322 aa4.01□□□□□ -1.77
SMC4-227ENST00000497984 RTKNQ9BST9 563 aa4.01□□□□□ -1.77
SMC4-227ENST00000497984 ZNF700Q9H0M5 742 aa4.01□□□□□ -1.77
SMC4-227ENST00000497984 ACAD9Q9H845 621 aa4.01□□□□□ -1.77
SMC4-227ENST00000497984 EVA1AQ9H8M9 152 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms