RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 REXO2Q9Y3B8 237 aaKnown RBP11.46□□□□□ -0.57
ERCC8-208ENST00000497892 CEP250Q9BV73 2442 aa11.46□□□□□ -0.58
ERCC8-208ENST00000497892 BCLAF3A2AJT9 711 aaKnown RBP11.45□□□□□ -0.58
ERCC8-208ENST00000497892 MID1O15344 667 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 ST8SIA5O15466 376 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 NDUFS2O75306 463 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 DXOO77932 396 aaKnown RBP11.45□□□□□ -0.58
ERCC8-208ENST00000497892 IL1BP01584 269 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 CD48P09326 243 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 TGM1P22735 817 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 IL4RP24394 825 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 SLC8A1P32418 973 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 GJC1P36383 396 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 MPLP40238 635 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 DHPSP49366 369 aaPredicted RBP11.45□□□□□ -0.58
ERCC8-208ENST00000497892 GSDMDP57764 484 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 SFSWAPQ12872 951 aaKnown RBP11.45□□□□□ -0.58
ERCC8-208ENST00000497892 DPYSL3Q14195 570 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 LYSMD4Q5XG99 296 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 TMCO3Q6UWJ1 677 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 ARMCX6Q7L4S7 300 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 CYP2U1Q7Z449 544 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 FAM124AQ86V42 546 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 ZNF354CQ86Y25 554 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 AADATQ8N5Z0 425 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 LZTR1Q8N653 840 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 CADM4Q8NFZ8 388 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 CASKIN2Q8WXE0 1202 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 FAM131CQ96AQ9 280 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 CELF6Q96J87 481 aaKnown RBP11.45□□□□□ -0.58
ERCC8-208ENST00000497892 ZNF670Q9BS34 389 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 SLC39A8Q9C0K1 460 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 PCED1AQ9H1Q7 454 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 ARRDC1-AS1Q9H2J1 176 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 TNKS2Q9H2K2 1166 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 PARD6AQ9NPB6 346 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 KLHL11Q9NVR0 708 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 FBXL12Q9NXK8 326 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 SERGEFQ9UGK8 458 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 SARDHQ9UL12 918 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 TFR2Q9UP52 801 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 MFHAS1Q9Y4C4 1052 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 ACTL7AQ9Y615 435 aa11.45□□□□□ -0.58
ERCC8-208ENST00000497892 A0A1W2PP55 124 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 ARHGAP42A6NI28 874 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 C1QTNF3-AMACRE9PGA6 284 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 BUB1O43683 1085 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 BNIP3LO60238 219 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 BUB1BO60566 1050 aaPredicted RBP11.44□□□□□ -0.58
ERCC8-208ENST00000497892 PRAMEF11O60813 436 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 TMCC1O94876 653 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 CTSLP07711 333 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 AMPD1P23109 780 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 ACSL1P33121 698 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 SERPINB6P35237 376 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 DRD3P35462 400 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 DPP6P42658 865 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 SLC1A1P43005 524 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 RECQLP46063 649 aaPredicted RBP11.44□□□□□ -0.58
ERCC8-208ENST00000497892 PAPOLAP51003 745 aaKnown RBP11.44□□□□□ -0.58
ERCC8-208ENST00000497892 METAP1P53582 386 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 CREB5Q02930 508 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 ZNF33AQ06730 810 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 SPEM2Q0P670 501 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 PDK2Q15119 407 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 CSRP2Q16527 193 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 ATP13A4Q4VNC1 1196 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 INO80DQ53TQ3 878 aaPredicted RBP11.44□□□□□ -0.58
ERCC8-208ENST00000497892 LRRC38Q5VT99 294 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 FAM46CQ5VWP2 391 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 PEAR1Q5VY43 1037 aaPredicted RBP11.44□□□□□ -0.58
ERCC8-208ENST00000497892 C11orf63Q6NUN7 778 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 LEKR1Q6ZMV7 388 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 DPY19L3Q6ZPD9 716 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 SLC41A1Q8IVJ1 513 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 GPR161Q8N6U8 529 aaKnown RBP11.44□□□□□ -0.58
ERCC8-208ENST00000497892 CHST14Q8NCH0 376 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 ACRBPQ8NEB7 543 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 PIP4K2CQ8TBX8 421 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 FOXJ1Q92949 421 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 ZNF775Q96BV0 537 aaPredicted RBP11.44□□□□□ -0.58
ERCC8-208ENST00000497892 FAF2Q96CS3 445 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 ZNF419Q96HQ0 510 aaPredicted RBP11.44□□□□□ -0.58
ERCC8-208ENST00000497892 HSPA12BQ96MM6 686 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 OMDQ99983 421 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 GPR174Q9BXC1 333 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 CALN1Q9BXU9 219 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 TM6SF2Q9BZW4 377 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 BTBD1Q9H0C5 482 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 SGK2Q9HBY8 427 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 ETNK2Q9NVF9 386 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 NCKAP1Q9Y2A7 1128 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 WASF2Q9Y6W5 498 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 GON4LQ3T8J9 2241 aa11.44□□□□□ -0.58
ERCC8-208ENST00000497892 DMXL1Q9Y485 3027 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 BTNL10A8MVZ5 291 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 ZNF487B1APH4 448 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 J3KR12 359 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 DFFAO00273 331 aa11.43□□□□□ -0.58
ERCC8-208ENST00000497892 SLC7A4O43246 635 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms