RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TMEM225BP0DP42 221 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 SRCP12931 536 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 ZFXP17010 805 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-224ENST00000497488 KCNA5P22460 613 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 FMO4P31512 558 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 PRKCIP41743 596 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 MTHFSP49914 203 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 DGKQP52824 942 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 ARF5P84085 180 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 NPRL3Q12980 569 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 BYSLQ13895 437 aaKnown RBP6.29□□□□□ -1.4
BRCA1-224ENST00000497488 HFEQ30201 348 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 ZNF648Q5T619 568 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-224ENST00000497488 KRT79Q5XKE5 535 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 OLFM4Q6UX06 510 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 C17orf99Q6UX52 265 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 GLDNQ6ZMI3 551 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-224ENST00000497488 GBP6Q6ZN66 633 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 SPATA19Q7Z5L4 167 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 ADCK2Q7Z695 626 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.29□□□□□ -1.4
BRCA1-224ENST00000497488 IQUBQ8NA54 791 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 C11orf65Q8NCR3 313 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 BEND2Q8NDZ0 799 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 KCNJ9Q92806 393 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 GTF3C6Q969F1 213 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 HDAC11Q96DB2 347 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 MMABQ96EY8 250 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-224ENST00000497488 RPL10LQ96L21 214 aaKnown RBP6.29□□□□□ -1.4
BRCA1-224ENST00000497488 FAM118BQ9BPY3 351 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 FERMT1Q9BQL6 677 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 GORASP1Q9BQQ3 440 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 NUP85Q9BW27 656 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 GLIS2Q9BZE0 524 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-224ENST00000497488 SLC5A7Q9GZV3 580 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 OR10A2Q9H208 303 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 HSD3B7Q9H2F3 369 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 EPB41L4BQ9H329 900 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 FANCFQ9NPI8 374 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 ZBTB40Q9NUA8 1239 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 C19orf73Q9NVV2 129 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 MTMR4Q9NYA4 1195 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 ZNF624Q9P2J8 865 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-224ENST00000497488 FETUBQ9UGM5 382 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 NFS1Q9Y697 457 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 CYP3A7-CYP3A51PA0A087WV96 503 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 LRRC53A6NM62 1247 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 SNAP23O00161 211 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 MSTNO14793 375 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 TRIM24O15164 1050 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 ZBTB43O43298 467 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 HS6ST1O60243 411 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 AVILO75366 819 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 CYP7B1O75881 506 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 TPPPO94811 219 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 SNX4O95219 450 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 ITGALP20701 1170 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 CYP3A7P24462 503 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 MGAT1P26572 445 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 IL15P40933 162 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-224ENST00000497488 PRPHP41219 470 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 RAB28P51157 221 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 ZNF81P51508 661 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 RPS6KA3P51812 740 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 EFNA5P52803 228 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 ARFIP1P53367 373 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 NPEPPSP55786 919 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 ZNF844Q08AG5 666 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 IKQ13123 557 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-224ENST00000497488 CBFBQ13951 182 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 SLC18A3Q16572 532 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 LEXMQ3ZCV2 418 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 IGSF11Q5DX21 431 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 AGBL4Q5VU57 503 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 ATG9BQ674R7 924 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 IRGCQ6NXR0 463 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 GJB7Q6PEY0 223 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 TSSK4Q6SA08 328 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 TMEM270Q6UE05 265 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 TMEM110Q86TL2 294 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 ABRAQ8N0Z2 381 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 MRPL43Q8N983 215 aaKnown RBP6.28□□□□□ -1.4
BRCA1-224ENST00000497488 Q8NA96 180 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 CAMKVQ8NCB2 501 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 MAFAQ8NHW3 353 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-224ENST00000497488 ZFP28Q8NHY6 868 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 BICD2Q8TD16 824 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 HASPINQ8TF76 798 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 ZCCHC14Q8WYQ9 949 aaKnown RBP6.28□□□□□ -1.4
BRCA1-224ENST00000497488 ZKSCAN4Q969J2 545 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-224ENST00000497488 PTERQ96BW5 349 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 MIEF2Q96C03 454 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 LINC00615Q96LM1 132 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-224ENST00000497488 GPHA2Q96T91 129 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 PKP4Q99569 1192 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 NTPCRQ9BSD7 190 aaKnown RBP6.28□□□□□ -1.4
BRCA1-224ENST00000497488 C17orf80Q9BSJ5 609 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 CRACR2AQ9BSW2 395 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 ZNF341Q9BYN7 854 aa6.28□□□□□ -1.4
BRCA1-224ENST00000497488 TRIM6Q9C030 488 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms