RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 IGFBPL1Q8WX77 278 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 SMG7Q92540 1137 aaKnown RBP4.31□□□□□ -1.72
SMC4-225ENST00000497203 IP6K1Q92551 441 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 MPHOSPH8Q99549 860 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 CHCHD6Q9BRQ6 235 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 SPRTNQ9H040 489 aaPredicted RBP4.31□□□□□ -1.72
SMC4-225ENST00000497203 RANBP17Q9H2T7 1088 aaKnown RBP4.31□□□□□ -1.72
SMC4-225ENST00000497203 MOV10Q9HCE1 1003 aaKnown RBP4.31□□□□□ -1.72
SMC4-225ENST00000497203 DIAPH3Q9NSV4 1193 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 GRHL1Q9NZI5 618 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 PEMTQ9UBM1 199 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 HDAC6Q9UBN7 1215 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 ICKQ9UPZ9 632 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 KAT6BQ8WYB5 2073 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 ARHGAP10A1A4S6 786 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 CXorf65A6NEN9 183 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 C2CD4BA6NLJ0 364 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 TTC36A6NLP5 189 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 TNFSF14O43557 240 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 DDAH2O95865 285 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 ADAP00813 363 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 LDHCP07864 332 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 HOXD9P28356 352 aaPredicted RBP4.3□□□□□ -1.72
SMC4-225ENST00000497203 BSGP35613 385 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 RARSP54136 660 aaKnown RBP4.3□□□□□ -1.72
SMC4-225ENST00000497203 RPL7AP62424 266 aaKnown RBP4.3□□□□□ -1.72
SMC4-225ENST00000497203 YWHAZP63104 245 aaKnown RBP4.3□□□□□ -1.72
SMC4-225ENST00000497203 SETQ01105 290 aaPredicted RBP4.3□□□□□ -1.72
SMC4-225ENST00000497203 GHRHRQ02643 423 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 CFHR1Q03591 330 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 NEXNQ0ZGT2 675 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 STIM1Q13586 685 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 EIF4A2Q14240 407 aaKnown RBP4.3□□□□□ -1.72
SMC4-225ENST00000497203 ERV3-1Q14264 604 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 RPE65Q16518 533 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 SLC9C1Q4G0N8 1177 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 ALG10Q5BKT4 473 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 ALG10BQ5I7T1 473 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 TTC39AQ5SRH9 613 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 GPATCH4Q5T3I0 446 aaKnown RBP4.3□□□□□ -1.72
SMC4-225ENST00000497203 SPATA1Q5VX52 437 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 TTLL5Q6EMB2 1281 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 CFAP161Q6P656 301 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 C17orf99Q6UX52 265 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 FAM57BQ71RH2 274 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 PRSS45Q7RTY3 260 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 TADA2BQ86TJ2 420 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 FAM185AQ8N0U4 392 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 ADSSL1Q8N142 457 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 TMEM217Q8N7C4 229 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 DENND1AQ8TEH3 1009 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 HDAC7Q8WUI4 952 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 KLHL29Q96CT2 875 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 FRMD8Q9BZ67 464 aaPredicted RBP4.3□□□□□ -1.72
SMC4-225ENST00000497203 TTYH1Q9H313 450 aaPredicted RBP4.3□□□□□ -1.72
SMC4-225ENST00000497203 HIPK3Q9H422 1215 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 ACTR5Q9H9F9 607 aaPredicted RBP4.3□□□□□ -1.72
SMC4-225ENST00000497203 MLXIPLQ9NP71 852 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 ATP8A2Q9NTI2 1148 aa4.3□□□□□ -1.72
SMC4-225ENST00000497203 SETD1BQ9UPS6 1966 aaKnown RBP4.3□□□□□ -1.72
SMC4-225ENST00000497203 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.29□□□□□ -1.72
SMC4-225ENST00000497203 FSD2A1L4K1 749 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 F8W810 466 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 PRPF4O43172 522 aaKnown RBP eCLIP4.29□□□□□ -1.72
SMC4-225ENST00000497203 TIPRLO75663 272 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 SEC14L2O76054 403 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 SPARCP09486 303 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 ACADMP11310 421 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 KLRC2P26717 231 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 YWHAQP27348 245 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 FMO4P31512 558 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 CIITAP33076 1130 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 MMP13P45452 471 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 CTCFP49711 727 aaPredicted RBP4.29□□□□□ -1.72
SMC4-225ENST00000497203 RPS13P62277 151 aaKnown RBP4.29□□□□□ -1.72
SMC4-225ENST00000497203 ZNF91Q05481 1191 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 MAMLD1Q13495 774 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 TRIP6Q15654 476 aaKnown RBP4.29□□□□□ -1.72
SMC4-225ENST00000497203 TBCEQ15813 527 aaPredicted RBP4.29□□□□□ -1.72
SMC4-225ENST00000497203 SLC9B1Q4ZJI4 515 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 PAPD7Q5XG87 772 aaKnown RBP4.29□□□□□ -1.72
SMC4-225ENST00000497203 AAGABQ6PD74 315 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 BRINP3Q76B58 766 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 FASTKD5Q7L8L6 764 aaKnown RBP4.29□□□□□ -1.72
SMC4-225ENST00000497203 GLCCI1Q86VQ1 547 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 WDR5BQ86VZ2 330 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 CCDC25Q86WR0 208 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 CCDC105Q8IYK2 499 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 PRSS3P2Q8NHM4 247 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 SCARB1Q8WTV0 552 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 SIGLEC11Q96RL6 698 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 BARD1Q99728 777 aaKnown RBP4.29□□□□□ -1.72
SMC4-225ENST00000497203 TUBB6Q9BUF5 446 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 USP44Q9H0E7 712 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 SLC32A1Q9H598 525 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 PAPOLBQ9NRJ5 636 aaKnown RBP4.29□□□□□ -1.72
SMC4-225ENST00000497203 BABAM1Q9NWV8 329 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 TRNAU1APQ9NX07 287 aaKnown RBP4.29□□□□□ -1.72
SMC4-225ENST00000497203 ZDHHC7Q9NXF8 308 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 TUBA8Q9NY65 449 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms