RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 TBC1D3GQ6DHY5 549 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 TBC1D3CQ6IPX1 549 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 TMEM150AQ86TG1 271 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 TBC1D3Q8IZP1 549 aaPredicted RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 PYROXD2Q8N2H3 581 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 IPMKQ8NFU5 416 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 RPLP0P6Q8NHW5 317 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 C1orf54Q8WWF1 131 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 IGSF8Q969P0 613 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 ISG20Q96AZ6 181 aaKnown RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 HDAC11Q96DB2 347 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 DCUN1D1Q96GG9 259 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 SLC39A8Q9C0K1 460 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 GOLPH3Q9H4A6 298 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 VPS51Q9UID3 782 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 DOLKQ9UPQ8 538 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 DRG1Q9Y295 367 aaKnown RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 RIF1Q5UIP0 2472 aaKnown RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 TCRBV21S2A2A0A5A6 115 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 PRAMEF11O60813 436 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 KLKB1P03952 638 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 C5AR1P21730 350 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 HOXD9P28356 352 aaPredicted RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 SERPINH1P50454 418 aaKnown RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 PARP6Q2NL67 630 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 ANO7Q6IWH7 933 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 SDCCAG8Q86SQ7 713 aaPredicted RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 REXO1L1PQ8IX06 675 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 ARHGEF2Q92974 986 aaKnown RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 SEMA3CQ99985 751 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 FOXP3Q9BZS1 431 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 ZCCHC2Q9C0B9 1178 aaKnown RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 XAB2Q9HCS7 855 aaKnown RBP8.76□□□□□ -1.01
U2AF1-212ENST00000496462 MOSPD1Q9UJG1 213 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 SNX10Q9Y5X0 201 aa8.76□□□□□ -1.01
U2AF1-212ENST00000496462 MUC3AQ02505 3323 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 PRR23AA6NEV1 266 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 RNF103O00237 685 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 PMPCBO75439 489 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 TMCC1O94876 653 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 SLU7O95391 586 aaKnown RBP8.75□□□□□ -1.01
U2AF1-212ENST00000496462 CDKN2BP42772 138 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 ARL4CP56559 192 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 C21orf59P57076 290 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 LGSNQ5TDP6 509 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 LPCAT2Q7L5N7 544 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 TMEM139Q8IV31 216 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 PALM2Q8IXS6 379 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 HDDC3Q8N4P3 179 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.75□□□□□ -1.01
U2AF1-212ENST00000496462 ZNF641Q96N77 438 aaPredicted RBP8.75□□□□□ -1.01
U2AF1-212ENST00000496462 ZMYND15Q9H091 742 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 RAB6BQ9NRW1 208 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 THAP10Q9P2Z0 257 aaPredicted RBP8.75□□□□□ -1.01
U2AF1-212ENST00000496462 MMP17Q9ULZ9 603 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 VPS9D1Q9Y2B5 631 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 A0A0A0MRY4 1105 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 GOLGA6L10A6NI86 522 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 CNTN5O94779 1100 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 SLC4A1P02730 911 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 PYGMP11217 842 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 HLA-DPA1P20036 260 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 HTR1BP28222 390 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 AKT2P31751 481 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 CNR2P34972 360 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 ARSEP51690 589 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 RPL26P61254 145 aaKnown RBP8.75□□□□□ -1.01
U2AF1-212ENST00000496462 PRAMEP78395 509 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 CDK16Q00536 496 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 MMRN1Q13201 1228 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 HNRNPA1L2Q32P51 320 aaKnown RBP8.75□□□□□ -1.01
U2AF1-212ENST00000496462 ATP13A4Q4VNC1 1196 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 ALFQ53S48 1182 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 FAM133BQ5BKY9 247 aaKnown RBP8.75□□□□□ -1.01
U2AF1-212ENST00000496462 PLD5Q8N7P1 536 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 OR14C36Q8NHC7 312 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 CYB5D2Q8WUJ1 264 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 SPATA13Q96N96 652 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 TSGA13Q96PP4 275 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 MLPHQ9BV36 600 aaPredicted RBP8.75□□□□□ -1.01
U2AF1-212ENST00000496462 AP1M1Q9BXS5 423 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 TRABDQ9H4I3 376 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 CACNA2D2Q9NY47 1150 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 RPL26L1Q9UNX3 145 aaKnown RBP8.75□□□□□ -1.01
U2AF1-212ENST00000496462 MAD1L1Q9Y6D9 718 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 MYH10P35580 1976 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 F5P12259 2224 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 PRR5-ARHGAP8B1AHC4 643 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 ATP1A1P05023 1023 aaKnown RBP8.75□□□□□ -1.01
U2AF1-212ENST00000496462 PMLP29590 882 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 SOX9P48436 509 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 THOP1P52888 689 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 CSTF1Q05048 431 aaKnown RBP8.75□□□□□ -1.01
U2AF1-212ENST00000496462 GPS1Q13098 491 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 STAT4Q14765 748 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 NOMO1Q15155 1222 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 PCSK7Q16549 785 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 SKIDA1Q1XH10 827 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 MYLK3Q32MK0 819 aa8.75□□□□□ -1.01
U2AF1-212ENST00000496462 INAVAQ3KP66 663 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms