RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 TRIM61Q5EBN2 209 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 KCNT1Q5JUK3 1230 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 DCAF12L1Q5VU92 463 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 AFMIDQ63HM1 303 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 DPY19L3Q6ZPD9 716 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 POLNQ7Z5Q5 900 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 RGL4Q8IZJ4 473 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 OR2T34Q8NGX1 318 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 SLC35G2Q8TBE7 412 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 PIP4K2CQ8TBX8 421 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 FAM71BQ8TC56 605 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 HMCESQ96FZ2 354 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 LRIG1Q96JA1 1093 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 BTBD6Q96KE9 485 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 C6orf106Q9H6K1 298 aaPredicted RBP12.6□□□□□ -0.39
MRPL55-233ENST00000495899 OSGEPQ9NPF4 335 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.6□□□□□ -0.39
MRPL55-233ENST00000495899 SPTLC3Q9NUV7 552 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 DLL3Q9NYJ7 618 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 RCOR3Q9P2K3 495 aaPredicted RBP12.6□□□□□ -0.39
MRPL55-233ENST00000495899 SERGEFQ9UGK8 458 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 IL36AQ9UHA7 158 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 SARDHQ9UL12 918 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.6□□□□□ -0.39
MRPL55-233ENST00000495899 A0A1B0GTW7 788 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 ARHGAP42A6NI28 874 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 C10orf142B7Z368 130 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 BNIP3LO60238 219 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 GSRP00390 522 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 KRT7P08729 469 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 TCF4P15884 667 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 DRD3P35462 400 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 SSR1P43307 286 aaKnown RBP12.59□□□□□ -0.39
MRPL55-233ENST00000495899 ID4P47928 161 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 CCR5P51681 352 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 IRX4P78413 519 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 PUM1Q14671 1186 aaKnown RBP eCLIP12.59□□□□□ -0.39
MRPL55-233ENST00000495899 RSPO4Q2I0M5 234 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-233ENST00000495899 DAB2IPQ5VWQ8 1189 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 KIAA0895LQ68EN5 471 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 TCEAL6Q6IPX3 200 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-233ENST00000495899 ZNF354CQ86Y25 554 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 HSPH1Q92598 858 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 TCEAL3Q969E4 200 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 BIRC7Q96CA5 298 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 RMDN1Q96DB5 314 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 PPP1R16AQ96I34 528 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 HEPHQ9BQS7 1158 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 RTKNQ9BST9 563 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 SLC39A8Q9C0K1 460 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 KLC2Q9H0B6 622 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 TNKS2Q9H2K2 1166 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 SMOC1Q9H4F8 434 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 CAPN10Q9HC96 672 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 CDV3Q9UKY7 258 aaKnown RBP12.59□□□□□ -0.39
MRPL55-233ENST00000495899 FCF1Q9Y324 198 aaKnown RBP12.59□□□□□ -0.39
MRPL55-233ENST00000495899 DMXL1Q9Y485 3027 aa12.59□□□□□ -0.39
MRPL55-233ENST00000495899 LNP1A1A4G5 178 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 PATE3B3GLJ2 98 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 SLC30A4O14863 429 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 BCAT2O15382 392 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-233ENST00000495899 PLRG1O43660 514 aaKnown RBP12.58□□□□□ -0.4
MRPL55-233ENST00000495899 GDF9O60383 454 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 PRAMEF11O60813 436 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 POP4O95707 220 aaKnown RBP12.58□□□□□ -0.4
MRPL55-233ENST00000495899 CFIP05156 583 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 CTSLP07711 333 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 CD27P26842 260 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 MAOBP27338 520 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 CDC25BP30305 580 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 CYLC1P35663 651 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-233ENST00000495899 PAPOLAP51003 745 aaKnown RBP12.58□□□□□ -0.4
MRPL55-233ENST00000495899 DNA2P51530 1060 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 ADPRHP54922 357 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 SNRPD1P62314 119 aaKnown RBP12.58□□□□□ -0.4
MRPL55-233ENST00000495899 CNTN1Q12860 1018 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 PDK2Q15119 407 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 SPA17Q15506 151 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 SMTNL2Q2TAL5 461 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 MYLK3Q32MK0 819 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 STPG1Q5TH74 334 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 TXNRD3NBQ6F5E7 133 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 TMTC1Q8IUR5 882 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 MAP7D3Q8IWC1 876 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 CHST14Q8NCH0 376 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 OR2AP1Q8NGE2 309 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 OR14C36Q8NHC7 312 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 C1orf216Q8TAB5 229 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 RFFLQ8WZ73 363 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 TSC1Q92574 1164 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 CSPG4P5Q96PW8 444 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 HDAC8Q9BY41 377 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 ZDHHC5Q9C0B5 715 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 PCDH18Q9HCL0 1135 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 LUC7LQ9NQ29 371 aaKnown RBP12.58□□□□□ -0.4
MRPL55-233ENST00000495899 DYRK4Q9NR20 520 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 RXFP3Q9NSD7 469 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 IMPACTQ9P2X3 320 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 HECAQ9UBI9 543 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms