RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 FUT10Q6P4F1 479 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 DCLRE1AQ6PJP8 1040 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 FOXR2Q6PJQ5 311 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 MOXD1Q6UVY6 613 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 NPNTQ6UXI9 565 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 DGLUCYQ7Z3D6 616 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 C4orf19Q8IY42 314 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 EXOC8Q8IYI6 725 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 MAML2Q8IZL2 1156 aaPredicted RBP6.98□□□□□ -1.29
VIM-207ENST00000495528 BRIX1Q8TDN6 353 aaKnown RBP6.98□□□□□ -1.29
VIM-207ENST00000495528 HDAC7Q8WUI4 952 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 HAS1Q92839 578 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 MTFMTQ96DP5 389 aaKnown RBP6.98□□□□□ -1.29
VIM-207ENST00000495528 COLEC11Q9BWP8 271 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 APOL6Q9BWW8 343 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 PLEKHA4Q9H4M7 779 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 SARS2Q9NP81 518 aaKnown RBP6.98□□□□□ -1.29
VIM-207ENST00000495528 KCNMB3Q9NPA1 279 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 XPNPEP1Q9NQW7 623 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 ARHGEF3Q9NR81 526 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 OBP2AQ9NY56 170 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 RGL1Q9NZL6 768 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 HSFX1Q9UBD0 423 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 CACNG4Q9UBN1 327 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 MTO1Q9Y2Z2 717 aaKnown RBP6.98□□□□□ -1.29
VIM-207ENST00000495528 STK36Q9NRP7 1315 aa6.98□□□□□ -1.29
VIM-207ENST00000495528 VPS13AQ96RL7 3174 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 UNC119BA6NIH7 251 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 A6NNZ2 444 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 INO80B-WBP1J3KQ70 363 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 DKC1O60832 514 aaKnown RBP eCLIP6.97□□□□□ -1.29
VIM-207ENST00000495528 ERLIN2O94905 339 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 MATN4O95460 622 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 TNFRSF1AP19438 455 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 AXLP30530 894 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 IL12RB1P42701 662 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 STARD6P59095 220 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 PTENP60484 403 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 NTHL1P78549 312 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 RESTQ13127 1097 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 HTR4Q13639 388 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 PKP1Q13835 747 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 CTTNQ14247 550 aaKnown RBP6.97□□□□□ -1.29
VIM-207ENST00000495528 FGL2Q14314 439 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 EMC2Q15006 297 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 USP41Q3LFD5 358 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 XKR9Q5GH70 373 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 KHDC1LQ5JSQ8 128 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 IGFL4Q6B9Z1 124 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 PPP4R4Q6NUP7 873 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 NOTUMQ6P988 496 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 PRSS55Q6UWB4 352 aaPredicted RBP6.97□□□□□ -1.29
VIM-207ENST00000495528 PARM1Q6UWI2 310 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 OTUD6AQ7L8S5 288 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 GRASPQ7Z6J2 395 aaPredicted RBP6.97□□□□□ -1.29
VIM-207ENST00000495528 CDR2LQ86X02 465 aaPredicted RBP6.97□□□□□ -1.29
VIM-207ENST00000495528 PDPRQ8NCN5 879 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 CPEB3Q8NE35 698 aaKnown RBP6.97□□□□□ -1.29
VIM-207ENST00000495528 TCP11Q8WWU5 503 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 RUBCNQ92622 972 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 FGF14Q92915 247 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 RNF31Q96EP0 1072 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 FAM20AQ96MK3 541 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 PNKPQ96T60 521 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 LXNQ9BS40 222 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 NXF3Q9H4D5 531 aaKnown RBP6.97□□□□□ -1.29
VIM-207ENST00000495528 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.97□□□□□ -1.29
VIM-207ENST00000495528 ZDHHC7Q9NXF8 308 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 GPRC5BQ9NZH0 403 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 CHMP5Q9NZZ3 219 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 FNIP2Q9P278 1114 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 CFAP97Q9P2B7 532 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 ADAM28Q9UKQ2 775 aa6.97□□□□□ -1.29
VIM-207ENST00000495528 MTF2Q9Y483 593 aaPredicted RBP6.97□□□□□ -1.29
VIM-207ENST00000495528 DENND4AQ7Z401 1863 aa6.96□□□□□ -1.29
VIM-207ENST00000495528 PRSS29PA6NIE9 313 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 BTBD18B2RXH4 712 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 B4GALT5O43286 388 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 CCNT1O60563 726 aaKnown RBP6.96□□□□□ -1.3
VIM-207ENST00000495528 TADA2AO75478 443 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 SLITRK3O94933 977 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 C1RP00736 705 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 ARF4P18085 180 aaPredicted RBP6.96□□□□□ -1.3
VIM-207ENST00000495528 HDCP19113 662 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 DDIT3P35638 169 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 ZNF135P52742 658 aaPredicted RBP6.96□□□□□ -1.3
VIM-207ENST00000495528 NUCB2P80303 420 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 CYP4A11Q02928 519 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 MBTD1Q05BQ5 628 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 POU5F1BQ06416 359 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 NCBP1Q09161 790 aaKnown RBP6.96□□□□□ -1.3
VIM-207ENST00000495528 SAFBQ15424 915 aaKnown RBP eCLIP6.96□□□□□ -1.3
VIM-207ENST00000495528 ANO6Q4KMQ2 910 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 TIGD2Q4W5G0 525 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 SLC44A4Q53GD3 710 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 FNDC7Q5VTL7 733 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 NCAPH2Q6IBW4 605 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 GALNT17Q6IS24 598 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 NEK8Q86SG6 692 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 GPR65Q8IYL9 337 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms