RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 CCDC13Q8IYE1 715 aa17.39■□□□□ 0.37
HDAC6-235ENST00000495515 STK40Q8N2I9 435 aa17.39■□□□□ 0.37
HDAC6-235ENST00000495515 SLC35F6Q8N357 371 aa17.39■□□□□ 0.37
HDAC6-235ENST00000495515 RYBPQ8N488 228 aaPredicted RBP17.39■□□□□ 0.37
HDAC6-235ENST00000495515 MDGA1Q8NFP4 955 aa17.39■□□□□ 0.37
HDAC6-235ENST00000495515 OR2A12Q8NGT7 310 aa17.39■□□□□ 0.37
HDAC6-235ENST00000495515 OLFM3Q96PB7 478 aa17.39■□□□□ 0.37
HDAC6-235ENST00000495515 FERMT1Q9BQL6 677 aa17.39■□□□□ 0.37
HDAC6-235ENST00000495515 TM6SF2Q9BZW4 377 aa17.39■□□□□ 0.37
HDAC6-235ENST00000495515 MKRN2Q9H000 416 aaKnown RBP17.39■□□□□ 0.37
HDAC6-235ENST00000495515 ZSCAN32Q9NX65 697 aa17.39■□□□□ 0.37
HDAC6-235ENST00000495515 HACD1B0YJ81 288 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 MTSS1O43312 755 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 ZNF189O75820 626 aaPredicted RBP17.38■□□□□ 0.37
HDAC6-235ENST00000495515 POP4O95707 220 aaKnown RBP17.38■□□□□ 0.37
HDAC6-235ENST00000495515 ADH1BP00325 375 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 IL1BP01584 269 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 CHRNA3P32297 505 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 CNR2P34972 360 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 PXNP49023 591 aaPredicted RBP17.38■□□□□ 0.37
HDAC6-235ENST00000495515 FNTBP49356 437 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 PTPN5P54829 565 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 ADCY2Q08462 1091 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 AP1B1Q10567 949 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 XRCC4Q13426 336 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 CYTH1Q15438 398 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 USP39Q53GS9 565 aaKnown RBP17.38■□□□□ 0.37
HDAC6-235ENST00000495515 DCAF12L1Q5VU92 463 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 ZC3H14Q6PJT7 736 aaKnown RBP17.38■□□□□ 0.37
HDAC6-235ENST00000495515 DPY19L3Q6ZPD9 716 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 TFB1MQ8WVM0 346 aaKnown RBP17.38■□□□□ 0.37
HDAC6-235ENST00000495515 LRIG1Q96JA1 1093 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 PSKH2Q96QS6 385 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 FAM129BQ96TA1 746 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 HEPHQ9BQS7 1158 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 HECAQ9UBI9 543 aaPredicted RBP17.38■□□□□ 0.37
HDAC6-235ENST00000495515 AMACRQ9UHK6 382 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 PCDHGA2Q9Y5H1 932 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 ATG2BQ96BY7 2078 aa17.38■□□□□ 0.37
HDAC6-235ENST00000495515 MUC22E2RYF6 1773 aaPredicted RBP17.38■□□□□ 0.37
HDAC6-235ENST00000495515 MYO18AQ92614 2054 aaKnown RBP17.37■□□□□ 0.37
HDAC6-235ENST00000495515 ENC1O14682 589 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 ZNF821O75541 412 aaPredicted RBP17.37■□□□□ 0.37
HDAC6-235ENST00000495515 C7P10643 843 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 CCNB1P14635 433 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 PECAM1P16284 738 aaPredicted RBP17.37■□□□□ 0.37
HDAC6-235ENST00000495515 C5AR1P21730 350 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 MMP13P45452 471 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 MAPK8P45983 427 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 CSNK1DP48730 415 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 CCNHP51946 323 aaPredicted RBP17.37■□□□□ 0.37
HDAC6-235ENST00000495515 RPS14P62263 151 aaKnown RBP17.37■□□□□ 0.37
HDAC6-235ENST00000495515 NSUN2Q08J23 767 aaKnown RBP eCLIP17.37■□□□□ 0.37
HDAC6-235ENST00000495515 SLC10A7Q0GE19 358 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 CCDC15Q0P6D6 951 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 GRM3Q14832 879 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 CST6Q15828 149 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 MYLK3Q32MK0 819 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 AADACL2Q6P093 401 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 MMAAQ8IVH4 418 aaKnown RBP17.37■□□□□ 0.37
HDAC6-235ENST00000495515 TMIEQ8NEW7 156 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 MAIP1Q8WWC4 291 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 MAML1Q92585 1016 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 NELL1Q92832 810 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 HAUS1Q96CS2 278 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 PBKQ96KB5 322 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 SPACA7Q96KW9 195 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 LGMNQ99538 433 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 TPSD1Q9BZJ3 242 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 SAE1Q9UBE0 346 aaPredicted RBP17.37■□□□□ 0.37
HDAC6-235ENST00000495515 LHX3Q9UBR4 397 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 IL36AQ9UHA7 158 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 NCKAP1Q9Y2A7 1128 aa17.37■□□□□ 0.37
HDAC6-235ENST00000495515 PEX11BO96011 259 aa17.36■□□□□ 0.37
HDAC6-235ENST00000495515 SLC8A1P32418 973 aa17.36■□□□□ 0.37
HDAC6-235ENST00000495515 PSMD8P48556 350 aa17.36■□□□□ 0.37
HDAC6-235ENST00000495515 OTUD4Q01804 1114 aaKnown RBP17.36■□□□□ 0.37
HDAC6-235ENST00000495515 NOMO1Q15155 1222 aa17.36■□□□□ 0.37
HDAC6-235ENST00000495515 KBTBD6Q86V97 674 aa17.36■□□□□ 0.37
HDAC6-235ENST00000495515 C11orf74Q86VG3 221 aa17.36■□□□□ 0.37
HDAC6-235ENST00000495515 ZC3H18Q86VM9 953 aaKnown RBP17.36■□□□□ 0.37
HDAC6-235ENST00000495515 SLC13A5Q86YT5 568 aaPredicted RBP17.36■□□□□ 0.37
HDAC6-235ENST00000495515 TEX26Q8N6G2 289 aa17.36■□□□□ 0.37
HDAC6-235ENST00000495515 TSEN2Q8NCE0 465 aaKnown RBP17.36■□□□□ 0.37
HDAC6-235ENST00000495515 PIP4K2CQ8TBX8 421 aa17.36■□□□□ 0.37
HDAC6-235ENST00000495515 ACTL9Q8TC94 416 aa17.36■□□□□ 0.37
HDAC6-235ENST00000495515 GANCQ8TET4 914 aa17.36■□□□□ 0.37
HDAC6-235ENST00000495515 PPP1R16AQ96I34 528 aa17.36■□□□□ 0.37
HDAC6-235ENST00000495515 OSBPL1AQ9BXW6 950 aa17.36■□□□□ 0.37
HDAC6-235ENST00000495515 FRMD8P1Q9BZ68 369 aaPredicted RBP17.36■□□□□ 0.37
HDAC6-235ENST00000495515 ZDHHC6Q9H6R6 413 aa17.36■□□□□ 0.37
HDAC6-235ENST00000495515 ITM2CQ9NQX7 267 aa17.36■□□□□ 0.37
HDAC6-235ENST00000495515 DYRK4Q9NR20 520 aa17.36■□□□□ 0.37
HDAC6-235ENST00000495515 PPM1HQ9ULR3 514 aa17.36■□□□□ 0.37
HDAC6-235ENST00000495515 CHD5Q8TDI0 1954 aa17.36■□□□□ 0.37
HDAC6-235ENST00000495515 H0Y858 1186 aa17.35■□□□□ 0.37
HDAC6-235ENST00000495515 H7C0C1 242 aa17.35■□□□□ 0.37
HDAC6-235ENST00000495515 KRIT1O00522 736 aa17.35■□□□□ 0.37
HDAC6-235ENST00000495515 CEP104O60308 925 aa17.35■□□□□ 0.37
HDAC6-235ENST00000495515 CES1P23141 567 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms