RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 RBM41Q96IZ5 413 aaKnown RBP19.76■□□□□ 0.75
HDAC4-212ENST00000495497 SPACA7Q96KW9 195 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 CCDC114Q96M63 670 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 HERPUD2Q9BSE4 406 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 HEMGNQ9BXL5 484 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 EPC1Q9H2F5 836 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 PABPC3Q9H361 631 aaKnown RBP19.76■□□□□ 0.75
HDAC4-212ENST00000495497 SAE1Q9UBE0 346 aaPredicted RBP19.76■□□□□ 0.75
HDAC4-212ENST00000495497 FARP1Q9Y4F1 1045 aaPredicted RBP19.76■□□□□ 0.75
HDAC4-212ENST00000495497 CACNA1HO95180 2353 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 A0A1W2PP55 124 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 INSIG1O15503 277 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 MAP3K13O43283 966 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 CST8O60676 142 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 GSRP00390 522 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 C7P10643 843 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 PYGMP11217 842 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 GARSP41250 739 aaKnown RBP19.75■□□□□ 0.75
HDAC4-212ENST00000495497 SLC10A7Q0GE19 358 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 ZNF211Q13398 564 aaPredicted RBP19.75■□□□□ 0.75
HDAC4-212ENST00000495497 BYSLQ13895 437 aaKnown RBP19.75■□□□□ 0.75
HDAC4-212ENST00000495497 PLK5Q496M5 336 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 TFDP3Q5H9I0 405 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 FAM182AQ5T1J6 154 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 B4GALNT4Q76KP1 1039 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 REXO1L1PQ8IX06 675 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 AADATQ8N5Z0 425 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 TSEN2Q8NCE0 465 aaKnown RBP19.75■□□□□ 0.75
HDAC4-212ENST00000495497 OR2AP1Q8NGE2 309 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 HEPHQ9BQS7 1158 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 DUSP15Q9H1R2 295 aaPredicted RBP19.75■□□□□ 0.75
HDAC4-212ENST00000495497 ZDHHC6Q9H6R6 413 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 IL36AQ9UHA7 158 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 EVLQ9UI08 416 aaPredicted RBP19.75■□□□□ 0.75
HDAC4-212ENST00000495497 WASF2Q9Y6W5 498 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 EML5Q05BV3 1969 aa19.75■□□□□ 0.75
HDAC4-212ENST00000495497 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 TTC24A2A3L6 582 aaPredicted RBP19.74■□□□□ 0.75
HDAC4-212ENST00000495497 MUSKO15146 869 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 ALOX15BO15296 676 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 LEFTY1O75610 366 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 RNASEH2AO75792 299 aaKnown RBP19.74■□□□□ 0.75
HDAC4-212ENST00000495497 ADH1BP00325 375 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 ZFXP17010 805 aaPredicted RBP19.74■□□□□ 0.75
HDAC4-212ENST00000495497 CD6P30203 668 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 RGRP47804 291 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 SNRPD1P62314 119 aaKnown RBP19.74■□□□□ 0.75
HDAC4-212ENST00000495497 ZBTB16Q05516 673 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 LBRQ14739 615 aaKnown RBP19.74■□□□□ 0.75
HDAC4-212ENST00000495497 MYLK3Q32MK0 819 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 TTC31Q49AM3 519 aaPredicted RBP19.74■□□□□ 0.75
HDAC4-212ENST00000495497 DSG4Q86SJ6 1040 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 TMEFF1Q8IYR6 380 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 HDDC3Q8N4P3 179 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 UBL4BQ8N7F7 174 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 SUMF1Q8NBK3 374 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 VOPP1Q96AW1 172 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 ARRDC3Q96B67 414 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 HAUS1Q96CS2 278 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 TOE1Q96GM8 510 aaKnown RBP19.74■□□□□ 0.75
HDAC4-212ENST00000495497 HES6Q96HZ4 224 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 OMDQ99983 421 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 CINPQ9BW66 212 aaPredicted RBP19.74■□□□□ 0.75
HDAC4-212ENST00000495497 NEUROG2Q9H2A3 272 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 TRMT1Q9NXH9 659 aaKnown RBP19.74■□□□□ 0.75
HDAC4-212ENST00000495497 FBXL12Q9NXK8 326 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 WSB2Q9NYS7 404 aaPredicted RBP19.74■□□□□ 0.75
HDAC4-212ENST00000495497 PYCARDQ9ULZ3 195 aa19.74■□□□□ 0.75
HDAC4-212ENST00000495497 SMG5Q9UPR3 1016 aaKnown RBP19.74■□□□□ 0.75
HDAC4-212ENST00000495497 MIF4GDA9UHW6 222 aaKnown RBP19.73■□□□□ 0.75
HDAC4-212ENST00000495497 KPNA3O00505 521 aaPredicted RBP19.73■□□□□ 0.75
HDAC4-212ENST00000495497 KRIT1O00522 736 aa19.73■□□□□ 0.75
HDAC4-212ENST00000495497 GJB3O75712 270 aa19.73■□□□□ 0.75
HDAC4-212ENST00000495497 PECAM1P16284 738 aaPredicted RBP19.73■□□□□ 0.75
HDAC4-212ENST00000495497 ACSL1P33121 698 aa19.73■□□□□ 0.75
HDAC4-212ENST00000495497 DRD3P35462 400 aa19.73■□□□□ 0.75
HDAC4-212ENST00000495497 TFDP2Q14188 446 aa19.73■□□□□ 0.75
HDAC4-212ENST00000495497 PPP2R5EQ16537 467 aa19.73■□□□□ 0.75
HDAC4-212ENST00000495497 TMCO4Q5TGY1 634 aa19.73■□□□□ 0.75
HDAC4-212ENST00000495497 DCAF12L1Q5VU92 463 aa19.73■□□□□ 0.75
HDAC4-212ENST00000495497 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.73■□□□□ 0.75
HDAC4-212ENST00000495497 PLPP6Q8IY26 295 aa19.73■□□□□ 0.75
HDAC4-212ENST00000495497 CCNYQ8ND76 341 aa19.73■□□□□ 0.75
HDAC4-212ENST00000495497 TMIEQ8NEW7 156 aa19.73■□□□□ 0.75
HDAC4-212ENST00000495497 NKD2Q969F2 451 aaPredicted RBP19.73■□□□□ 0.75
HDAC4-212ENST00000495497 GDAP1L1Q96MZ0 367 aa19.73■□□□□ 0.75
HDAC4-212ENST00000495497 ZNF599Q96NL3 588 aa19.73■□□□□ 0.75
HDAC4-212ENST00000495497 LGMNQ99538 433 aa19.73■□□□□ 0.75
HDAC4-212ENST00000495497 VPS13AQ96RL7 3174 aa19.72■□□□□ 0.75
HDAC4-212ENST00000495497 C1QTNF3-AMACRE9PGA6 284 aa19.72■□□□□ 0.75
HDAC4-212ENST00000495497 IGSF6O95976 241 aa19.72■□□□□ 0.75
HDAC4-212ENST00000495497 IGLV3-19P01714 112 aa19.72■□□□□ 0.75
HDAC4-212ENST00000495497 PRNPP04156 253 aa19.72■□□□□ 0.75
HDAC4-212ENST00000495497 C5AR1P21730 350 aa19.72■□□□□ 0.75
HDAC4-212ENST00000495497 COPS2P61201 443 aa19.72■□□□□ 0.75
HDAC4-212ENST00000495497 RPL6Q02878 288 aaKnown RBP19.72■□□□□ 0.75
HDAC4-212ENST00000495497 CNTN1Q12860 1018 aa19.72■□□□□ 0.75
HDAC4-212ENST00000495497 RFTN1Q14699 578 aaPredicted RBP19.72■□□□□ 0.75
HDAC4-212ENST00000495497 MEI1Q5TIA1 1274 aa19.72■□□□□ 0.75
HDAC4-212ENST00000495497 FAM46CQ5VWP2 391 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms