RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 ASMTLO95671 621 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 MT-ND3P03897 115 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 POLBP06746 335 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 PPP3CCP48454 512 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 TUBP50607 506 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 SLC18A2Q05940 514 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 TNK2Q07912 1038 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 ITIH4Q14624 930 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 RNF19BQ6ZMZ0 732 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 ARHGAP12Q8IWW6 846 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 AGGF1Q8N302 714 aaeCLIP16.56■□□□□ 0.24
CBX4-204ENST00000495122 ANKS4BQ8N8V4 417 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 SEPT5Q99719 369 aaPredicted RBP16.56■□□□□ 0.24
CBX4-204ENST00000495122 ZYG11BQ9C0D3 744 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 SIK2Q9H0K1 926 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 OSER1Q9NX31 292 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 MARCH2Q9P0N8 246 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 MAD1L1Q9Y6D9 718 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 HELZP42694 1942 aaKnown RBP16.55■□□□□ 0.24
CBX4-204ENST00000495122 ANAPC1Q9H1A4 1944 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 H0Y858 1186 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 KCNK1O00180 336 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 MSI1O43347 362 aaKnown RBP16.55■□□□□ 0.24
CBX4-204ENST00000495122 KIAA0754O94854 1291 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 ABLIM3O94929 683 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 VNN2O95498 520 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 CSH1P0DML2 217 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 CSH2P0DML3 217 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 CA4P22748 312 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 MAPKAPK2P49137 400 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 USP46P62068 366 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 TAF10Q12962 218 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 TIFABQ6ZNK6 161 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 PIGWQ7Z7B1 504 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 ZNF683Q8IZ20 524 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 ANKRD42Q8N9B4 389 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 ZNF461Q8TAF7 563 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 ITFG1Q8TB96 612 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 ZSCAN18Q8TBC5 510 aaPredicted RBP16.55■□□□□ 0.24
CBX4-204ENST00000495122 FGF13Q92913 245 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 FGF14Q92915 247 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 AZIN2Q96A70 460 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 PGLYRP2Q96PD5 576 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 FCRL5Q96RD9 977 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 HAUS2Q9NVX0 235 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 DNMT3BQ9UBC3 853 aaKnown RBP16.55■□□□□ 0.24
CBX4-204ENST00000495122 CFAP54Q96N23 3096 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 DMDP11532 3685 aa16.55■□□□□ 0.24
CBX4-204ENST00000495122 GOLGA6L7A0A1B0GV03 622 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 ARHGAP42A6NI28 874 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 DRGXA6NNA5 263 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 PI15O43692 258 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 CCNB1P14635 433 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 GPR15P49685 360 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 GEMP55040 296 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 ARPP19P56211 112 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 CDH17Q12864 832 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 DBN1Q16643 649 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 C5orf22Q49AR2 442 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 PABPC1LQ4VXU2 614 aaKnown RBP16.54■□□□□ 0.24
CBX4-204ENST00000495122 C10orf120Q5SQS8 335 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 ARTNQ5T4W7 220 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 PIK3R6Q5UE93 754 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 BANPQ8N9N5 519 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 CCDC197Q8NCU1 140 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 ST13P5Q8NFI4 369 aaPredicted RBP16.54■□□□□ 0.24
CBX4-204ENST00000495122 GPR152Q8TDT2 470 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 ACMSDQ8TDX5 336 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 PTCD2Q8WV60 388 aaKnown RBP16.54■□□□□ 0.24
CBX4-204ENST00000495122 ATOH1Q92858 354 aaPredicted RBP16.54■□□□□ 0.24
CBX4-204ENST00000495122 TRMT2BQ96GJ1 504 aaKnown RBP16.54■□□□□ 0.24
CBX4-204ENST00000495122 APOPT1Q96IL0 206 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 SEC16BQ96JE7 1060 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 IL22Q9GZX6 179 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 PLAC1Q9HBJ0 212 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 SLC2A4RGQ9NR83 387 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 CA14Q9ULX7 337 aa16.54■□□□□ 0.24
CBX4-204ENST00000495122 FAM237BA0A1B0GVD1 139 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 ZBTB24O43167 697 aaPredicted RBP16.53■□□□□ 0.24
CBX4-204ENST00000495122 MAFKO60675 156 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 USP1O94782 785 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 VIMP08670 466 aaKnown RBP16.53■□□□□ 0.24
CBX4-204ENST00000495122 CREB1P16220 341 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 KRT4P19013 534 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 NFKB1P19838 968 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 CD68P34810 354 aaPredicted RBP16.53■□□□□ 0.24
CBX4-204ENST00000495122 CCNFP41002 786 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 YBEYP58557 167 aaPredicted RBP16.53■□□□□ 0.24
CBX4-204ENST00000495122 MGAT5Q09328 741 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 EFEMP1Q12805 493 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 ZBTB17Q13105 803 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 DUSP4Q13115 394 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 HNRNPDQ14103 355 aaKnown RBP16.53■□□□□ 0.24
CBX4-204ENST00000495122 MPP2Q14168 576 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 CRYMQ14894 314 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 EFTUD2Q15029 972 aaKnown RBP eCLIP16.53■□□□□ 0.244e-7■■■□□ 17.2
CBX4-204ENST00000495122 SEPT7Q16181 437 aaKnown RBP16.53■□□□□ 0.24
CBX4-204ENST00000495122 PDK4Q16654 411 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 PARP15Q460N3 678 aa16.53■□□□□ 0.24
CBX4-204ENST00000495122 MS4A13Q5J8X5 152 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms