RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 MBLAC2Q68D91 279 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 KYAT3Q6YP21 454 aaKnown RBP13.64□□□□□ -0.23
GPC1-209ENST00000495100 BNC2Q6ZN30 1099 aaPredicted RBP13.64□□□□□ -0.23
GPC1-209ENST00000495100 TAS2R42Q7RTR8 314 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 C3orf58Q8NDZ4 430 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 SEPHS2Q99611 448 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 SPC25Q9HBM1 224 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 ABT1Q9ULW3 272 aaKnown RBP13.64□□□□□ -0.23
GPC1-209ENST00000495100 MYADML2A6NDP7 307 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 AHSGP02765 367 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 LYNP07948 512 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 PRSS56P0CW18 603 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 YWHAQP27348 245 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 THOP1P52888 689 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 STX1BP61266 288 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 CDH17Q12864 832 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 PFKFB4Q16877 469 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 LRRC8BQ6P9F7 803 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 DHDDSQ86SQ9 333 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 CHSY1Q86X52 802 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 MIER2Q8N344 545 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 KYQ8NBH2 561 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 MAGEC3Q8TD91 643 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 HDAC10Q969S8 669 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 TUBGCP3Q96CW5 907 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 WDR41Q9HAD4 459 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 SEMA4BQ9NPR2 832 aaPredicted RBP13.64□□□□□ -0.23
GPC1-209ENST00000495100 IPO11Q9UI26 975 aaKnown RBP13.64□□□□□ -0.23
GPC1-209ENST00000495100 EMCNQ9ULC0 261 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 MAGEA13PA6NCF6 341 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 SMAPO00193 183 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 KATNA1O75449 491 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 GNAZP19086 355 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 PIK3CGP48736 1102 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 ECT2LQ008S8 904 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 DSC2Q02487 901 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 PPP1R8Q12972 351 aaKnown RBP13.63□□□□□ -0.23
GPC1-209ENST00000495100 HSF5Q4G112 596 aaPredicted RBP13.63□□□□□ -0.23
GPC1-209ENST00000495100 SATL1Q86VE3 508 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 PARP8Q8N3A8 854 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 FAXDC2Q96IV6 333 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 CPNE1Q99829 537 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 DCUN1D5Q9BTE7 237 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 KLHL4Q9C0H6 718 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 VTA1Q9NP79 307 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 ADAMTS6Q9UKP5 1117 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 TIMM22Q9Y584 194 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 ZNF839A8K0R7 811 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 RNASEH1O60930 286 aaKnown RBP13.63□□□□□ -0.23
GPC1-209ENST00000495100 RANBP1P43487 201 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 GHRHRQ02643 423 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 NUMA1Q14980 2115 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 TEX44Q53QW1 395 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 SH3D19Q5HYK7 790 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 GPR158Q5T848 1215 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 KIAA0319Q5VV43 1072 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 DQX1Q8TE96 717 aaKnown RBP13.63□□□□□ -0.23
GPC1-209ENST00000495100 ARNTL2Q8WYA1 636 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 C7orf26Q96N11 449 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 SERPINI1Q99574 410 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 MRPL1Q9BYD6 325 aaKnown RBP13.63□□□□□ -0.23
GPC1-209ENST00000495100 PLAC1Q9HBJ0 212 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 FAM105AQ9NUU6 356 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 NCKIPSDQ9NZQ3 722 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 RRN3P2A6NIE6 340 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 SUPT3HB4E1H0 165 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 UGT1A6P19224 532 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 PRKCHP24723 683 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 GSTT1P30711 240 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 PGFP49763 221 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 RPL14P50914 215 aaKnown RBP13.63□□□□□ -0.23
GPC1-209ENST00000495100 INCA1Q0VD86 236 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 TWF1Q12792 350 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 ZNF235Q14590 738 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 NEPROQ6NW34 567 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 C16orf59Q7L2K0 433 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 MYO1HQ8N1T3 1032 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 CYGBQ8WWM9 190 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 C1orf50Q9BV19 199 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 VPS33BQ9H267 617 aa13.63□□□□□ -0.23
GPC1-209ENST00000495100 ACADSP16219 412 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 RBBP5Q15291 538 aaKnown RBP13.62□□□□□ -0.23
GPC1-209ENST00000495100 PLA2G4EQ3MJ16 856 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 C6orf10Q5SRN2 563 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 MILR1Q7Z6M3 343 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 DSELQ8IZU8 1212 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 ZNF276Q8N554 614 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 PDZD8Q8NEN9 1154 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 DNAJB14Q8TBM8 379 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 HSFY1Q96LI6 401 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 CIB1Q99828 191 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 LIN28AQ9H9Z2 209 aaKnown RBP13.62□□□□□ -0.23
GPC1-209ENST00000495100 RRAGCQ9HB90 399 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 RHBDL2Q9NX52 303 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 HACD3Q9P035 362 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 SIRPGQ9P1W8 387 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 SLC12A8A0AV02 714 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 TADA2AO75478 443 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 DDHD2O94830 711 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 ELNP15502 786 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms