RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 RETSATQ6NUM9 610 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 GUSBP11Q6P575 273 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 CRTC1Q6UUV9 634 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 DPY19L3Q6ZPD9 716 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 FAM183BPQ6ZVS7 135 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 ZSCAN30Q86W11 494 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 PASD1Q8IV76 773 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 TRIM59Q8IWR1 403 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 SPATA20Q8TB22 786 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 SNRNP27Q8WVK2 155 aaKnown RBP14.55□□□□□ -0.08
VARS-228ENST00000495010 BTN2A2Q8WVV5 523 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 SPON2Q9BUD6 331 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 SRRTQ9BXP5 876 aaKnown RBP14.55□□□□□ -0.08
VARS-228ENST00000495010 TKTL2Q9H0I9 626 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 SYNDIG1Q9H7V2 258 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 RRN3Q9NYV6 651 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 SALL4Q9UJQ4 1053 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 PAXBP1Q9Y5B6 917 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 PCDHGA8Q9Y5G5 932 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 EME2A4GXA9 379 aaPredicted RBP14.54□□□□□ -0.08
VARS-228ENST00000495010 K7ENP7 123 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 NEMP1O14524 444 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 MUSKO15146 869 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 LZTS3O60299 673 aaPredicted RBP14.54□□□□□ -0.08
VARS-228ENST00000495010 TCEA3O75764 348 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 ADRB3P13945 408 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 CD44P16070 742 aaKnown RBP14.54□□□□□ -0.08
VARS-228ENST00000495010 ITGB7P26010 798 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 OR1E1P30953 314 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 L1CAMP32004 1257 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 SLC6A3Q01959 620 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 BRMS1LQ5PSV4 323 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 KIAA1614Q5VZ46 1190 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 TTI2Q6NXR4 508 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 INO80CQ6PI98 192 aaPredicted RBP14.54□□□□□ -0.08
VARS-228ENST00000495010 TFAP2DQ7Z6R9 452 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 WDR36Q8NI36 951 aaKnown RBP14.54□□□□□ -0.08
VARS-228ENST00000495010 WDR48Q8TAF3 677 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 HEPHQ9BQS7 1158 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 SPASTQ9UBP0 616 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 STAP1Q9ULZ2 295 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 CTNND2Q9UQB3 1225 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 ENTPD2Q9Y5L3 495 aa14.54□□□□□ -0.08
VARS-228ENST00000495010 HEMK1Q9Y5R4 338 aaPredicted RBP14.54□□□□□ -0.08
VARS-228ENST00000495010 A0A0D9SEW6 157 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 PYCARD-AS1I3L0S3 204 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 RNF103O00237 685 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 TPP1O14773 563 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 TNFSF15O95150 251 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 KRT9P35527 623 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 SULT1E1P49888 294 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 THOP1P52888 689 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 RNASE9P60153 205 aaKnown RBP14.53□□□□□ -0.08
VARS-228ENST00000495010 SLC20A2Q08357 652 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 PTK2BQ14289 1009 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 CARD16Q5EG05 197 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 ACBD5Q5T8D3 534 aaPredicted RBP14.53□□□□□ -0.08
VARS-228ENST00000495010 OLFML1Q6UWY5 402 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 PRICKLE2Q7Z3G6 844 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 CREBRFQ8IUR6 639 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 WDTC1Q8N5D0 677 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 PCDH20Q8N6Y1 951 aaKnown RBP14.53□□□□□ -0.08
VARS-228ENST00000495010 C1orf131Q8NDD1 294 aaKnown RBP14.53□□□□□ -0.08
VARS-228ENST00000495010 NAT6Q93015 286 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 TIGD1Q96MW7 591 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 LENG8Q96PV6 779 aaPredicted RBP14.53□□□□□ -0.08
VARS-228ENST00000495010 FAM117AQ9C073 453 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 CEP44Q9C0F1 390 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 ZDHHC6Q9H6R6 413 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 ATP13A1Q9HD20 1204 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 GPR27Q9NS67 375 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 PIGVQ9NUD9 493 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 ARHGEF38Q9NXL2 777 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.53□□□□□ -0.08
VARS-228ENST00000495010 MPP6Q9NZW5 540 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 MAN1B1Q9UKM7 699 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 FADS3Q9Y5Q0 445 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 WASF2Q9Y6W5 498 aa14.53□□□□□ -0.08
VARS-228ENST00000495010 CCDC187A0A096LP49 1063 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 RAD51BO15315 384 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 ARHGAP6O43182 974 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 TSPAN6O43657 245 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 AP1G1O43747 822 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 SRGAP2O75044 1071 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 WISP1O95388 367 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 FGFR1OPO95684 399 aaKnown RBP14.52□□□□□ -0.09
VARS-228ENST00000495010 F9P00740 461 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 ERBB2P04626 1255 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 ANXA6P08133 673 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 MLLT3P42568 568 aaPredicted RBP14.52□□□□□ -0.09
VARS-228ENST00000495010 CXCR3P49682 368 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 SERPINH1P50454 418 aaKnown RBP14.52□□□□□ -0.09
VARS-228ENST00000495010 STX17P56962 302 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 PTK2Q05397 1052 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 DEUP1Q05D60 604 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 SPIDRQ14159 915 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 FGL2Q14314 439 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 ESRP1Q6NXG1 681 aaKnown RBP14.52□□□□□ -0.09
VARS-228ENST00000495010 GJB7Q6PEY0 223 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 FOXR2Q6PJQ5 311 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms