RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 LEFTY1O75610 366 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 KCNK5O95279 499 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 CTSLP07711 333 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 CEACAM1P13688 526 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 ARL4AP40617 200 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 HCAR3P49019 387 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 METAP1P53582 386 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 SERINC3Q13530 473 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 INO80DQ53TQ3 878 aaPredicted RBP17.96■□□□□ 0.47
HDAC4-211ENST00000494800 NEK5Q6P3R8 708 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 ERN2Q76MJ5 926 aaKnown RBP17.96■□□□□ 0.47
HDAC4-211ENST00000494800 NIPA2Q8N8Q9 360 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 OR2AP1Q8NGE2 309 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 HMCESQ96FZ2 354 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 CCDC42Q96M95 316 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 PEBP4Q96S96 227 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 HDAC8Q9BY41 377 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 TM6SF2Q9BZW4 377 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 TRIM5Q9C035 493 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 ZDHHC6Q9H6R6 413 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 AASDHPPTQ9NRN7 309 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 CTTNBP2NLQ9P2B4 639 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 DNAH14Q0VDD8 3507 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 NYNRINQ9P2P1 1898 aaKnown RBP17.95■□□□□ 0.46
HDAC4-211ENST00000494800 A0A1B0GVT2 93 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 MED19A0JLT2 244 aaPredicted RBP17.95■□□□□ 0.46
HDAC4-211ENST00000494800 UPK3BL1B0FP48 263 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 UPK3BL2E5RIL1 263 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 PLK4O00444 970 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 MFAP3LO75121 409 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 ZNF821O75541 412 aaPredicted RBP17.95■□□□□ 0.46
HDAC4-211ENST00000494800 H2AFZP0C0S5 128 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 ITGB7P26010 798 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 SSR1P43307 286 aaKnown RBP17.95■□□□□ 0.46
HDAC4-211ENST00000494800 NEK3P51956 506 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 RHOAP61586 193 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 MAPK8IP2Q13387 824 aaPredicted RBP17.95■□□□□ 0.46
HDAC4-211ENST00000494800 CA9Q16790 459 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 HADHQ16836 314 aaKnown RBP17.95■□□□□ 0.46
HDAC4-211ENST00000494800 SETMARQ53H47 684 aaPredicted RBP17.95■□□□□ 0.46
HDAC4-211ENST00000494800 PSAPL1Q6NUJ1 521 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 FBXL19Q6PCT2 694 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 SARM1Q6SZW1 724 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 LEKR1Q6ZMV7 388 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 H2AFVQ71UI9 128 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 TRIM69Q86WT6 500 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 LZTR1Q8N653 840 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 ZNF564Q8TBZ8 553 aaPredicted RBP17.95■□□□□ 0.46
HDAC4-211ENST00000494800 HSPH1Q92598 858 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 SERAC1Q96JX3 654 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 GDAP1L1Q96MZ0 367 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 KCTD15Q96SI1 283 aaPredicted RBP17.95■□□□□ 0.46
HDAC4-211ENST00000494800 OSBPL1AQ9BXW6 950 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 NOL6Q9H6R4 1146 aaKnown RBP17.95■□□□□ 0.46
HDAC4-211ENST00000494800 GAREM1Q9H706 876 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.95■□□□□ 0.46
HDAC4-211ENST00000494800 UVRAGQ9P2Y5 699 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 DMTF1Q9Y222 760 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 ANKRD6Q9Y2G4 727 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 WASF2Q9Y6W5 498 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 LAMA1P25391 3075 aa17.95■□□□□ 0.46
HDAC4-211ENST00000494800 AKR1B15C9JRZ8 316 aaPredicted RBP17.94■□□□□ 0.46
HDAC4-211ENST00000494800 KRIT1O00522 736 aa17.94■□□□□ 0.46
HDAC4-211ENST00000494800 LATO43561 262 aa17.94■□□□□ 0.46
HDAC4-211ENST00000494800 TMCC1O94876 653 aa17.94■□□□□ 0.46
HDAC4-211ENST00000494800 POP4O95707 220 aaKnown RBP17.94■□□□□ 0.46
HDAC4-211ENST00000494800 CD160O95971 181 aa17.94■□□□□ 0.46
HDAC4-211ENST00000494800 IGSF6O95976 241 aa17.94■□□□□ 0.46
HDAC4-211ENST00000494800 ERCC2P18074 760 aa17.94■□□□□ 0.46
HDAC4-211ENST00000494800 HNRNPDQ14103 355 aaKnown RBP17.94■□□□□ 0.46
HDAC4-211ENST00000494800 DPYSL2Q16555 572 aa17.94■□□□□ 0.46
HDAC4-211ENST00000494800 HLA-BQ31612 363 aa17.94■□□□□ 0.46
HDAC4-211ENST00000494800 KCNT1Q5JUK3 1230 aa17.94■□□□□ 0.46
HDAC4-211ENST00000494800 PIP5KL1Q5T9C9 394 aa17.94■□□□□ 0.46
HDAC4-211ENST00000494800 OR2I1PQ8NGU4 316 aa17.94■□□□□ 0.46
HDAC4-211ENST00000494800 TEKT4Q8WW24 435 aa17.94■□□□□ 0.46
HDAC4-211ENST00000494800 SLC6A18Q96N87 628 aa17.94■□□□□ 0.46
HDAC4-211ENST00000494800 ANP32EQ9BTT0 268 aa17.94■□□□□ 0.46
HDAC4-211ENST00000494800 LRRC19Q9H756 370 aa17.94■□□□□ 0.46
HDAC4-211ENST00000494800 UBA2Q9UBT2 640 aaPredicted RBP17.94■□□□□ 0.46
HDAC4-211ENST00000494800 ACTL7AQ9Y615 435 aa17.94■□□□□ 0.46
HDAC4-211ENST00000494800 VILLO15195 856 aa17.93■□□□□ 0.46
HDAC4-211ENST00000494800 DFNA5O60443 496 aa17.93■□□□□ 0.46
HDAC4-211ENST00000494800 MAGEC1O60732 1142 aa17.93■□□□□ 0.46
HDAC4-211ENST00000494800 ADRB1P08588 477 aa17.93■□□□□ 0.46
HDAC4-211ENST00000494800 ZNF883P0CG24 379 aa17.93■□□□□ 0.46
HDAC4-211ENST00000494800 CD38P28907 300 aa17.93■□□□□ 0.46
HDAC4-211ENST00000494800 MAT2AP31153 395 aaKnown RBP17.93■□□□□ 0.46
HDAC4-211ENST00000494800 ADKP55263 362 aaKnown RBP17.93■□□□□ 0.46
HDAC4-211ENST00000494800 PPP2CBP62714 309 aa17.93■□□□□ 0.46
HDAC4-211ENST00000494800 PPP2CAP67775 309 aa17.93■□□□□ 0.46
HDAC4-211ENST00000494800 KRT81Q14533 505 aa17.93■□□□□ 0.46
HDAC4-211ENST00000494800 SUZ12Q15022 739 aaKnown RBP17.93■□□□□ 0.46
HDAC4-211ENST00000494800 KIF19Q2TAC6 998 aa17.93■□□□□ 0.46
HDAC4-211ENST00000494800 SMTNL2Q2TAL5 461 aa17.93■□□□□ 0.46
HDAC4-211ENST00000494800 MYLK3Q32MK0 819 aa17.93■□□□□ 0.46
HDAC4-211ENST00000494800 NAPEPLDQ6IQ20 393 aa17.93■□□□□ 0.46
HDAC4-211ENST00000494800 CYP4V2Q6ZWL3 525 aaPredicted RBP17.93■□□□□ 0.46
HDAC4-211ENST00000494800 ARRDC3Q96B67 414 aa17.93■□□□□ 0.46
HDAC4-211ENST00000494800 ARHGEF26Q96DR7 871 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms