RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 OSBPL1AQ9BXW6 950 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 WDR55Q9H6Y2 383 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-209ENST00000494623 ABI2Q9NYB9 513 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-209ENST00000494623 NOD1Q9Y239 953 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 E9PAM4 449 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 TNFRSF10BO14763 440 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 MAP3K7O43318 606 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 ZBTB14O43829 449 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 PDE5AO76074 875 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 UPP2O95045 317 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 SBK3P0C264 359 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 MYL4P12829 197 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 HADHAP40939 763 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 CHRNA4P43681 627 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 NAGLUP54802 743 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 GEMP55040 296 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 ZNF33AQ06730 810 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 CUL3Q13618 768 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 SLC12A1Q13621 1099 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 DSC3Q14574 896 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 MYLK4Q86YV6 388 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-209ENST00000494623 SCML4Q8N228 414 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 TMEM151AQ8N4L1 468 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 TRPV6Q9H1D0 765 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 TRMT13Q9NUP7 481 aaKnown RBP11.37□□□□□ -0.59
CHMP3-209ENST00000494623 NSMCE4AQ9NXX6 385 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 ANGPTL2Q9UKU9 493 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 ACOT9Q9Y305 439 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 HS3ST4Q9Y661 456 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 FGF10O15520 208 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-209ENST00000494623 SLC35E2BP0CK96 405 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 CD1EP15812 388 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 DNAJB2P25686 324 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 AP2B1P63010 937 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 ITKQ08881 620 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 ZRSR2Q15696 482 aaKnown RBP11.36□□□□□ -0.59
CHMP3-209ENST00000494623 DDR2Q16832 855 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 ARL13AQ5H913 290 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-209ENST00000494623 FSCBQ5H9T9 825 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 NOMO2Q5JPE7 1267 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 FRMD7Q6ZUT3 714 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 ZNF280BQ86YH2 543 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 SPNS2Q8IVW8 549 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 CEP97Q8IW35 865 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 DEFB107AQ8IZN7 70 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 FSTL5Q8N475 847 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-209ENST00000494623 LZTR1Q8N653 840 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 NXNL1Q96CM4 212 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 SUSD3Q96L08 255 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 OMDQ99983 421 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 SMOC2Q9H3U7 446 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 OSER1Q9NX31 292 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 ANKRD6Q9Y2G4 727 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-209ENST00000494623 TTC3P53804 2025 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 DDHD2O94830 711 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 PIGNO95427 931 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 APOA4P06727 396 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 COX4I1P13073 169 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 SERPINB5P36952 375 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 ARCN1P48444 511 aaKnown RBP11.36□□□□□ -0.59
CHMP3-209ENST00000494623 GPR15P49685 360 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 LIPMQ5VYY2 423 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 ZYG11AQ6WRX3 759 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 BEND5Q7L4P6 421 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 TFAP2DQ7Z6R9 452 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 MFSD6LQ8IWD5 586 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 HIPK4Q8NE63 616 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 CCDC124Q96CT7 223 aaKnown RBP11.36□□□□□ -0.59
CHMP3-209ENST00000494623 SGF29Q96ES7 293 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 ELMO2Q96JJ3 720 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 TCF7L2Q9NQB0 619 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 IPO11Q9UI26 975 aaKnown RBP11.36□□□□□ -0.59
CHMP3-209ENST00000494623 MID2Q9UJV3 735 aa11.36□□□□□ -0.59
CHMP3-209ENST00000494623 FAM95CA0A1B0GW59 222 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 H2AFYO75367 372 aaKnown RBP11.35□□□□□ -0.59
CHMP3-209ENST00000494623 SMNDC1O75940 238 aaKnown RBP eCLIP11.35□□□□□ -0.59
CHMP3-209ENST00000494623 CABYRO75952 493 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 SKIP12755 728 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 EPHA3P29320 983 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 FLT3LGP49771 235 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 RPL14P50914 215 aaKnown RBP11.35□□□□□ -0.59
CHMP3-209ENST00000494623 KLF10Q13118 480 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 UGP2Q16851 508 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 MANEALQ5VSG8 457 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 RGMBQ6NW40 437 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 CENPLQ8N0S6 344 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-209ENST00000494623 PNPLA1Q8N8W4 532 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 MRGPRX2Q96LB1 330 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 DRC3Q9H069 523 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 ENTPD7Q9NQZ7 604 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 ZDHHC2Q9UIJ5 367 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 PPM1HQ9ULR3 514 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 RAP2CQ9Y3L5 183 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 TCAF1Q9Y4C2 921 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 TRPM7Q96QT4 1865 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 SEPT4O43236 478 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 B4GALT3O60512 393 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 STMN1P16949 149 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 TFEBP19484 476 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms