RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 HLA-DQA1Q5Y7H0 255 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 SDE2Q6IQ49 451 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 TOGARAM2Q6ZUX3 1019 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 BHLHA9Q7RTU4 235 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 SLCO6A1Q86UG4 719 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 RASSF3Q86WH2 238 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 ZSWIM9Q86XI8 627 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 MLKLQ8NB16 471 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 RLN3Q8WXF3 142 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 CNOT6LQ96LI5 555 aaKnown RBP8.42□□□□□ -1.06
RIF1-211ENST00000494333 MED15Q96RN5 788 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 JMJD8Q96S16 334 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 SPATA9Q9BWV2 254 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 INTS2Q9H0H0 1204 aaKnown RBP8.42□□□□□ -1.06
RIF1-211ENST00000494333 CNGB3Q9NQW8 809 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 OLA1Q9NTK5 396 aaKnown RBP8.42□□□□□ -1.06
RIF1-211ENST00000494333 BCCIPQ9P287 314 aaKnown RBP eCLIP8.42□□□□□ -1.06
RIF1-211ENST00000494333 SFMBT1Q9UHJ3 866 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 AGO1Q9UL18 857 aaKnown RBP8.42□□□□□ -1.06
RIF1-211ENST00000494333 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.42□□□□□ -1.06
RIF1-211ENST00000494333 OTOGLQ3ZCN5 2332 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 GVINP1Q7Z2Y8 2422 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 DMDP11532 3685 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 ATG2BQ96BY7 2078 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 TCRBV21S2A2A0A5A6 115 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 M0QYV0 167 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 FOXD2O60548 495 aaPredicted RBP8.41□□□□□ -1.06
RIF1-211ENST00000494333 EPN2O95208 641 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 CYBBP04839 570 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 THBDP07204 575 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 SNRPB2P08579 225 aaKnown RBP8.41□□□□□ -1.06
RIF1-211ENST00000494333 ZNF806P0C7X5 589 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 KRT5P13647 590 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 HOXB2P14652 356 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 SLC9A1P19634 815 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 NTSR1P30989 418 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 ANP32AP39687 249 aaKnown RBP8.41□□□□□ -1.06
RIF1-211ENST00000494333 HARS2P49590 506 aaKnown RBP8.41□□□□□ -1.06
RIF1-211ENST00000494333 DAOAP59103 153 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 SF3A2Q15428 464 aaKnown RBP8.41□□□□□ -1.06
RIF1-211ENST00000494333 TRMT11Q7Z4G4 463 aaKnown RBP8.41□□□□□ -1.06
RIF1-211ENST00000494333 IRF2BP1Q8IU81 584 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 FMNL3Q8IVF7 1028 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 CHPFQ8IZ52 775 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 SCML4Q8N228 414 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 DDI1Q8WTU0 396 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 HMGB4Q8WW32 186 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 ERLEC1Q96DZ1 483 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 P2RY11Q96G91 374 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 HSFY1Q96LI6 401 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 ACOX2Q99424 681 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 DNAJC7Q99615 494 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 PLCD4Q9BRC7 762 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 CRACR2AQ9BSW2 395 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 MIS12Q9H081 205 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 SMOC1Q9H4F8 434 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 GPR160Q9UJ42 338 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 FBXO10Q9UK96 956 aa8.41□□□□□ -1.06
RIF1-211ENST00000494333 CFAP54Q96N23 3096 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 WASH3PC4AMC7 463 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 TSPAN3O60637 253 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 LETM1O95202 739 aaPredicted RBP8.4□□□□□ -1.06
RIF1-211ENST00000494333 PENKP01210 267 aaPredicted RBP8.4□□□□□ -1.06
RIF1-211ENST00000494333 SCG5P05408 212 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 PAMP19021 973 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 BCKDHBP21953 392 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 MPLP40238 635 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 USP8P40818 1118 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 ECI1P42126 302 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 GPD2P43304 727 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 MTIF2P46199 727 aaKnown RBP8.4□□□□□ -1.06
RIF1-211ENST00000494333 DHPSP49366 369 aaPredicted RBP8.4□□□□□ -1.06
RIF1-211ENST00000494333 ZNF132P52740 706 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 MFAP3P55082 362 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 GFRA1P56159 465 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 APBA1Q02410 837 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 CREB5Q02930 508 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 KCNMB1Q16558 191 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 ARHGAP44Q17R89 818 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 AASDHQ4L235 1098 aaPredicted RBP8.4□□□□□ -1.06
RIF1-211ENST00000494333 MPPE1Q53F39 396 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 EGFLAMQ63HQ2 1017 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 GJB7Q6PEY0 223 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 TRIM65Q6PJ69 517 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 GBP6Q6ZN66 633 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 ENOSF1Q7L5Y1 443 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 C11orf74Q86VG3 221 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 CPXM2Q8N436 756 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 FRMD1Q8N878 549 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 OLIG1Q8TAK6 271 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 CLEC4CQ8WTT0 213 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 FRS2Q8WU20 508 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 ZNF606Q8WXB4 792 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 IRGQQ8WZA9 623 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 GOLGA1Q92805 767 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 TMA16Q96EY4 203 aaKnown RBP8.4□□□□□ -1.06
RIF1-211ENST00000494333 CCDC140Q96MF4 163 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 RTKNQ9BST9 563 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 AARSD1Q9BTE6 412 aaKnown RBP8.4□□□□□ -1.06
RIF1-211ENST00000494333 RNF32Q9H0A6 362 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms