RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 CPA1P15085 419 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 HOXD9P28356 352 aaPredicted RBP2.56□□□□□ -2
LMNB1-207ENST00000494185 TUBP50607 506 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 RASSF2P50749 326 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 NR1H2P55055 460 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 ROR2Q01974 943 aaKnown RBP2.56□□□□□ -2
LMNB1-207ENST00000494185 RHAGQ02094 409 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 HLFQ16534 295 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 SMTNL2Q2TAL5 461 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 MIDNQ504T8 468 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 FAM133BQ5BKY9 247 aaKnown RBP2.56□□□□□ -2
LMNB1-207ENST00000494185 CBWD5Q5RIA9 395 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 WASHC2DQ5SRD0 308 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 LRCH2Q5VUJ6 765 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 DENND1BQ6P3S1 775 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 MTFR2Q6P444 385 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 KDELC2Q7Z4H8 507 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 KRT77Q7Z794 578 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 HEATR4Q86WZ0 1026 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 GHDCQ8N2G8 530 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 ZNF366Q8N895 744 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 FAM110DQ8TAY7 271 aaPredicted RBP2.56□□□□□ -2
LMNB1-207ENST00000494185 IP6K1Q92551 441 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 SLC25A28Q96A46 364 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 LYZL4Q96KX0 146 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 CD180Q99467 661 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 NTPCRQ9BSD7 190 aaKnown RBP2.56□□□□□ -2
LMNB1-207ENST00000494185 PIMREGQ9BSJ6 248 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 HERC2P3Q9BVR0 1158 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 PLEKHA5Q9HAU0 1116 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 OLA1Q9NTK5 396 aaKnown RBP2.56□□□□□ -2
LMNB1-207ENST00000494185 ALKBH4Q9NXW9 302 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 PLK2Q9NYY3 685 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 NCKIPSDQ9NZQ3 722 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 MSRB1Q9NZV6 116 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 TBC1D14Q9P2M4 693 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 FBXO4Q9UKT5 387 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 COG5Q9UP83 839 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 GDAQ9Y2T3 454 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 RAP2CQ9Y3L5 183 aa2.56□□□□□ -2
LMNB1-207ENST00000494185 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.56□□□□□ -2
LMNB1-207ENST00000494185 LY6G6EA0A0G2JKS1 128 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 TCRBV7S3A2A0A539 114 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 VWA3AA6NCI4 1184 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 ASAP2O43150 1006 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 TMCC2O75069 709 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 NDUFB8O95169 186 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 IFNA2P01563 188 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 IL1AP01583 271 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 CYP1A2P05177 515 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 PRSS2P07478 247 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 WEE2P0C1S8 567 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 CBSLP0DN79 551 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 PCNAP12004 261 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 ENO3P13929 434 aaPredicted RBP2.55□□□□□ -2
LMNB1-207ENST00000494185 HOXB6P17509 224 aaKnown RBP2.55□□□□□ -2
LMNB1-207ENST00000494185 PRKCHP24723 683 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 KLRC2P26717 231 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 TYK2P29597 1187 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 AVPR2P30518 371 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 RFC1P35251 1148 aaPredicted RBP2.55□□□□□ -2
LMNB1-207ENST00000494185 CBSP35520 551 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 POLD2P49005 469 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 MVDP53602 400 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 ARHGAP8P85298 464 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 NUCB1Q02818 461 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 EGR4Q05215 589 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 PPATQ06203 517 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.55□□□□□ -2
LMNB1-207ENST00000494185 BYSLQ13895 437 aaKnown RBP2.55□□□□□ -2
LMNB1-207ENST00000494185 SEMA3AQ14563 771 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 TOMM20Q15388 145 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 PLK5Q496M5 336 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 Q5PR19 223 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 DNTTIP2Q5QJE6 756 aaKnown RBP2.55□□□□□ -2
LMNB1-207ENST00000494185 PIK3CD-AS1Q5SR53 167 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 GPATCH4Q5T3I0 446 aaKnown RBP2.55□□□□□ -2
LMNB1-207ENST00000494185 RNF144BQ7Z419 303 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.55□□□□□ -2
LMNB1-207ENST00000494185 PATL1Q86TB9 770 aaKnown RBP2.55□□□□□ -2
LMNB1-207ENST00000494185 BRSK2Q8IWQ3 736 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 NRACQ8N912 160 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 TDRD9Q8NDG6 1382 aaKnown RBP2.55□□□□□ -2
LMNB1-207ENST00000494185 C2CD4CQ8TF44 421 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 WIPF2Q8TF74 440 aaPredicted RBP2.55□□□□□ -2
LMNB1-207ENST00000494185 TMEM174Q8WUU8 243 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 SLC35F5Q8WV83 523 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 FAR1Q8WVX9 515 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 IGFBPL1Q8WX77 278 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 MASTLQ96GX5 879 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 RSRC1Q96IZ7 334 aaKnown RBP2.55□□□□□ -2
LMNB1-207ENST00000494185 ZNF48Q96MX3 618 aaPredicted RBP2.55□□□□□ -2
LMNB1-207ENST00000494185 GFM1Q96RP9 751 aaKnown RBP2.55□□□□□ -2
LMNB1-207ENST00000494185 REEP2Q9BRK0 252 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 CHCHD6Q9BRQ6 235 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 GPR63Q9BZJ6 419 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 SPRTNQ9H040 489 aaPredicted RBP2.55□□□□□ -2
LMNB1-207ENST00000494185 EBF3Q9H4W6 596 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 AAMDCQ9H7C9 122 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 ACAD9Q9H845 621 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms