RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 MICAL2O94851 1124 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 ATP5BP06576 529 aaKnown RBP11.8□□□□□ -0.52
BRCA1-222ENST00000493919 OR4Q2P0C623 313 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 ZNF12P17014 697 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 GTF2H1P32780 548 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 SOX6P35712 828 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 MDH1P40925 334 aaKnown RBP11.8□□□□□ -0.52
BRCA1-222ENST00000493919 MTIF2P46199 727 aaKnown RBP11.8□□□□□ -0.52
BRCA1-222ENST00000493919 GNG11P61952 73 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 FOXK1P85037 733 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 TFF2Q03403 129 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 TRIM14Q14142 442 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 ZNF667Q5HYK9 610 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 AARS2Q5JTZ9 985 aaKnown RBP11.8□□□□□ -0.52
BRCA1-222ENST00000493919 GRTP1Q5TC63 336 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 GPR65Q8IYL9 337 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 ANKS4BQ8N8V4 417 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 ALKBH8Q96BT7 664 aaKnown RBP11.8□□□□□ -0.52
BRCA1-222ENST00000493919 SEC16BQ96JE7 1060 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 TBCBQ99426 244 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 PSD2Q9BQI7 771 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 RHOBTB2Q9BYZ6 727 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 XYLT2Q9H1B5 865 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 MAN1C1Q9NR34 630 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 GDAP2Q9NXN4 497 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 THEGQ9P2T0 379 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 AP3M1Q9Y2T2 418 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 BACE2Q9Y5Z0 518 aa11.8□□□□□ -0.52
BRCA1-222ENST00000493919 GMNCA6NCL1 334 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 HOXC11O43248 304 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-222ENST00000493919 CYP11A1P05108 521 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 RAP1GAPP47736 663 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 ST13P50502 369 aaKnown RBP11.79□□□□□ -0.52
BRCA1-222ENST00000493919 P2RX3P56373 397 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 ZNF33BQ06732 778 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 ADAM15Q13444 863 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 TAF12Q16514 161 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 VWA5B1Q5TIE3 1220 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 SLC8B1Q6J4K2 584 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 C15orf39Q6ZRI6 1047 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 MARK2Q7KZI7 788 aaKnown RBP11.79□□□□□ -0.52
BRCA1-222ENST00000493919 LIMS2Q7Z4I7 341 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 TRIM59Q8IWR1 403 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 TOP6BLQ8N6T0 577 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 ZNF540Q8NDQ6 660 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 FBXL13Q8NEE6 735 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 RAPGEF5Q92565 580 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 PGLYRP2Q96PD5 576 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 NEURL2Q9BR09 285 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 KCNN2Q9H2S1 579 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 THAP9Q9H5L6 903 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 DDX43Q9NXZ2 648 aaKnown RBP11.79□□□□□ -0.52
BRCA1-222ENST00000493919 ZMIZ1Q9ULJ6 1067 aa11.79□□□□□ -0.52
BRCA1-222ENST00000493919 A0A1B0GWJ7 208 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 WDR27A2RRH5 827 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 PSMD9O00233 223 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 SLC9A3R1O14745 358 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-222ENST00000493919 FANCGO15287 622 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 LRRN2O75325 713 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 CLN5O75503 358 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 OAZ2O95190 189 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 AFPP02771 609 aaKnown RBP11.78□□□□□ -0.52
BRCA1-222ENST00000493919 HOXA6P31267 233 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 NOS2P35228 1153 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 FMO5P49326 533 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 GDI2P50395 445 aaKnown RBP11.78□□□□□ -0.52
BRCA1-222ENST00000493919 ZNF135P52742 658 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-222ENST00000493919 CSNK2BP67870 215 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 MYL5Q02045 173 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 MRPL58Q14197 206 aaKnown RBP11.78□□□□□ -0.52
BRCA1-222ENST00000493919 ITIH4Q14624 930 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 ACAP2Q15057 778 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 SF3B4Q15427 424 aaKnown RBP eCLIP11.78□□□□□ -0.522e-6■■■□□ 15.1
BRCA1-222ENST00000493919 NPTX1Q15818 432 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 CCNG2Q16589 344 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 SOWAHAQ2M3V2 549 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 LIN9Q5TKA1 542 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 NIPAL1Q6NVV3 410 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 USP43Q70EL4 1123 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 THEM5Q8N1Q8 247 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 CAMKK1Q8N5S9 505 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 AOPEPQ8N6M6 819 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 ENDOVQ8N8Q3 282 aaKnown RBP11.78□□□□□ -0.52
BRCA1-222ENST00000493919 NAT8LQ8N9F0 302 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 OR10T2Q8NGX3 314 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 TMEM209Q96SK2 561 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 SMYD3Q9H7B4 428 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 RNPEPL1Q9HAU8 725 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 PLGRKTQ9HBL7 147 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 ADAM22Q9P0K1 906 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 RPL26L1Q9UNX3 145 aaKnown RBP11.78□□□□□ -0.52
BRCA1-222ENST00000493919 COG5Q9UP83 839 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 COQ6Q9Y2Z9 468 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 MAGEB3O15480 346 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 HCRTO43612 131 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 GREM1O60565 184 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 NIPSNAP2O75323 286 aa11.78□□□□□ -0.52
BRCA1-222ENST00000493919 STAU1O95793 577 aaKnown RBP11.78□□□□□ -0.52
BRCA1-222ENST00000493919 ASS1P00966 412 aaKnown RBP11.78□□□□□ -0.52
BRCA1-222ENST00000493919 P4HA1P13674 534 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms