RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 CEP152O94986 1710 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 FAM71AQ8IYT1 594 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 AGAP11Q8TF27 550 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 MBOAT7Q96N66 472 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 ZNF232Q9UNY5 417 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 ABLIM1O14639 778 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 GSTT1P30711 240 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 TTPAP49638 278 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 HIRAP54198 1017 aaPredicted RBP20.35■□□□□ 0.85
RNF40-203ENST00000493683 C1orf186Q6ZWK4 172 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 PEG10Q86TG7 708 aaKnown RBP20.35■□□□□ 0.85
RNF40-203ENST00000493683 ASZ1Q8WWH4 475 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 TBC1D10AQ9BXI6 508 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 EHD3Q9NZN3 535 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 CHD1O14646 1710 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 WWP2O00308 870 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 HDAC3O15379 428 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 PTDSS1P48651 473 aaKnown RBP20.35■□□□□ 0.85
RNF40-203ENST00000493683 CES3Q6UWW8 571 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 DNAJC14Q6Y2X3 702 aaPredicted RBP20.35■□□□□ 0.85
RNF40-203ENST00000493683 ZNF513Q8N8E2 541 aaPredicted RBP20.35■□□□□ 0.85
RNF40-203ENST00000493683 OR52L1Q8NGH7 329 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 SELENOMQ8WWX9 145 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 ACSS3Q9H6R3 686 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 GTF2BQ00403 316 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 FLCNQ8NFG4 579 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 BSNDQ8WZ55 320 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 FAM163AQ96GL9 167 aaPredicted RBP20.34■□□□□ 0.85
RNF40-203ENST00000493683 CCDC28BQ9BUN5 200 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 GBA2Q9HCG7 927 aaPredicted RBP20.34■□□□□ 0.85
RNF40-203ENST00000493683 SPG21Q9NZD8 308 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 ZNF24P17028 368 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 LRRN4CLQ8ND94 238 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 MAGEE2Q8TD90 523 aaPredicted RBP20.34■□□□□ 0.85
RNF40-203ENST00000493683 HASPINQ8TF76 798 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 SEMA4DQ92854 862 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 STARD7Q9NQZ5 370 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 A0A087X0B3 334 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 ANPEPP15144 967 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 PAX7P23759 505 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 GABRB2P47870 512 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 TAF5Q15542 800 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 DNAAF5Q86Y56 855 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 PCDH20Q8N6Y1 951 aaKnown RBP20.34■□□□□ 0.85
RNF40-203ENST00000493683 FAIM2Q9BWQ8 316 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 DGCR6LQ9BY27 220 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 CHKBQ9Y259 395 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 ANKDD1BA6NHY2 528 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 ZNF286BP0CG31 522 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 SOX10P56693 466 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 PPATQ06203 517 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 TRAP1Q12931 704 aaKnown RBP20.34■□□□□ 0.85
RNF40-203ENST00000493683 BBS12Q6ZW61 710 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 TSPAN18Q96SJ8 248 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 IDI2Q9BXS1 227 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 ABHD16BQ9H3Z7 469 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 SEMA4BQ9NPR2 832 aaPredicted RBP20.34■□□□□ 0.85
RNF40-203ENST00000493683 POLR1DQ9Y2S0 133 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 C2CD2Q9Y426 696 aa20.34■□□□□ 0.85
RNF40-203ENST00000493683 LIN7AO14910 233 aaPredicted RBP20.33■□□□□ 0.85
RNF40-203ENST00000493683 TRUB2O95900 331 aaKnown RBP20.33■□□□□ 0.85
RNF40-203ENST00000493683 PSEN1P49768 467 aa20.33■□□□□ 0.85
RNF40-203ENST00000493683 ATP6V0D1P61421 351 aa20.33■□□□□ 0.85
RNF40-203ENST00000493683 IRF8Q02556 426 aa20.33■□□□□ 0.85
RNF40-203ENST00000493683 MFSD10Q14728 455 aa20.33■□□□□ 0.85
RNF40-203ENST00000493683 ACOX1Q15067 660 aa20.33■□□□□ 0.85
RNF40-203ENST00000493683 EARS2Q5JPH6 523 aaKnown RBP20.33■□□□□ 0.85
RNF40-203ENST00000493683 DUPD1Q68J44 220 aa20.33■□□□□ 0.85
RNF40-203ENST00000493683 SLC38A2Q96QD8 506 aa20.33■□□□□ 0.85
RNF40-203ENST00000493683 ALG9Q9H6U8 611 aa20.33■□□□□ 0.85
RNF40-203ENST00000493683 TRPV2Q9Y5S1 764 aa20.33■□□□□ 0.85
RNF40-203ENST00000493683 OR6A2O95222 327 aa20.33■□□□□ 0.85
RNF40-203ENST00000493683 PABPC1LQ4VXU2 614 aaKnown RBP20.33■□□□□ 0.85
RNF40-203ENST00000493683 ILDR1Q86SU0 546 aaPredicted RBP20.33■□□□□ 0.85
RNF40-203ENST00000493683 UXS1Q8NBZ7 420 aa20.33■□□□□ 0.85
RNF40-203ENST00000493683 GMPPBQ9Y5P6 360 aa20.33■□□□□ 0.85
RNF40-203ENST00000493683 FAM237BA0A1B0GVD1 139 aa20.33■□□□□ 0.84
RNF40-203ENST00000493683 OR6B1O95007 311 aa20.33■□□□□ 0.84
RNF40-203ENST00000493683 GRIA3P42263 894 aa20.33■□□□□ 0.84
RNF40-203ENST00000493683 PROSER1Q86XN7 944 aa20.33■□□□□ 0.84
RNF40-203ENST00000493683 GATAD2AQ86YP4 633 aa20.33■□□□□ 0.84
RNF40-203ENST00000493683 RNF157Q96PX1 679 aa20.33■□□□□ 0.84
RNF40-203ENST00000493683 C2orf49Q9BVC5 232 aaPredicted RBP20.33■□□□□ 0.84
RNF40-203ENST00000493683 TRAFD1O14545 582 aaPredicted RBP20.33■□□□□ 0.84
RNF40-203ENST00000493683 CES1P23141 567 aa20.33■□□□□ 0.84
RNF40-203ENST00000493683 PSMB4P28070 264 aa20.33■□□□□ 0.84
RNF40-203ENST00000493683 NAGLUP54802 743 aa20.33■□□□□ 0.84
RNF40-203ENST00000493683 ITGADQ13349 1161 aa20.33■□□□□ 0.84
RNF40-203ENST00000493683 SPIDRQ14159 915 aa20.33■□□□□ 0.84
RNF40-203ENST00000493683 FAM20CQ8IXL6 584 aa20.33■□□□□ 0.84
RNF40-203ENST00000493683 PTGR2Q8N8N7 351 aaPredicted RBP20.33■□□□□ 0.84
RNF40-203ENST00000493683 AP3S1Q92572 193 aa20.33■□□□□ 0.84
RNF40-203ENST00000493683 TCF12Q99081 682 aa20.33■□□□□ 0.84
RNF40-203ENST00000493683 ULBP1Q9BZM6 244 aa20.33■□□□□ 0.84
RNF40-203ENST00000493683 NDUFB5O43674 189 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 DRD4P21917 467 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 PPIBP23284 216 aaKnown RBP20.32■□□□□ 0.84
RNF40-203ENST00000493683 AKAP5P24588 427 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 MAPKAPK3Q16644 382 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 PFKFB4Q16877 469 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 328.4 ms