RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 OSGEPQ9NPF4 335 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 CWC15Q9P013 229 aaKnown RBP7.11□□□□□ -1.27
TOP3A-207ENST00000493648 HECAQ9UBI9 543 aaPredicted RBP7.11□□□□□ -1.27
TOP3A-207ENST00000493648 SERGEFQ9UGK8 458 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 SARDHQ9UL12 918 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 NENFQ9UMX5 172 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 FCF1Q9Y324 198 aaKnown RBP7.11□□□□□ -1.27
TOP3A-207ENST00000493648 CHD5Q8TDI0 1954 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 ZNF292O60281 2723 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 NUMA1Q14980 2115 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 GVINP1Q7Z2Y8 2422 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 ADAMTS9Q9P2N4 1935 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 MYO15AQ9UKN7 3530 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 A0A1W2PPC4 97 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 DCDC2BA2VCK2 349 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 PLK4O00444 970 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 CDX4O14627 284 aaPredicted RBP7.1□□□□□ -1.27
TOP3A-207ENST00000493648 PLRG1O43660 514 aaKnown RBP7.1□□□□□ -1.27
TOP3A-207ENST00000493648 OPHN1O60890 802 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 ZNF821O75541 412 aaPredicted RBP7.1□□□□□ -1.27
TOP3A-207ENST00000493648 LEFTY1O75610 366 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 CD160O95971 181 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 IGSF6O95976 241 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 GSRP00390 522 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 CTSLP07711 333 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 RARAP10276 462 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 IL1R2P27930 398 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 NUDT1P36639 197 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 ARHGAP25P42331 645 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 MAPK8P45983 427 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 CSNK1EP49674 416 aaKnown RBP7.1□□□□□ -1.27
TOP3A-207ENST00000493648 AFF3P51826 1226 aaKnown RBP7.1□□□□□ -1.27
TOP3A-207ENST00000493648 CCNHP51946 323 aaPredicted RBP7.1□□□□□ -1.27
TOP3A-207ENST00000493648 ADPRHP54922 357 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 RHOAP61586 193 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 RACK1P63244 317 aaKnown RBP7.1□□□□□ -1.27
TOP3A-207ENST00000493648 FOXK2Q01167 660 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 CNTN1Q12860 1018 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 KRT81Q14533 505 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 DPYSL2Q16555 572 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 SMTNL2Q2TAL5 461 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 MYLK3Q32MK0 819 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 UAP1L1Q3KQV9 507 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 POM121L1PQ3SYA9 428 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 SLC45A4Q5BKX6 768 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 KCNT1Q5JUK3 1230 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 NEK5Q6P3R8 708 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 FBXL19Q6PCT2 694 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 IL27RAQ6UWB1 636 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 TMCO3Q6UWJ1 677 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 LEKR1Q6ZMV7 388 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 CYP4V2Q6ZWL3 525 aaPredicted RBP7.1□□□□□ -1.27
TOP3A-207ENST00000493648 ERN2Q76MJ5 926 aaKnown RBP7.1□□□□□ -1.27
TOP3A-207ENST00000493648 POLNQ7Z5Q5 900 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 ADAT2Q7Z6V5 191 aaKnown RBP7.1□□□□□ -1.27
TOP3A-207ENST00000493648 MAP7D3Q8IWC1 876 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 RHOT2Q8IXI1 618 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 ZCCHC9Q8N567 271 aaKnown RBP7.1□□□□□ -1.27
TOP3A-207ENST00000493648 KCTD6Q8NC69 237 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 OR2AP1Q8NGE2 309 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 C1orf216Q8TAB5 229 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 SLC35G2Q8TBE7 412 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 FAM131CQ96AQ9 280 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 MRFAP1L1Q96HT8 127 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 CELF6Q96J87 481 aaKnown RBP7.1□□□□□ -1.27
TOP3A-207ENST00000493648 GDAP1L1Q96MZ0 367 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 OSBPL1AQ9BXW6 950 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 PACSIN1Q9BY11 444 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 HDAC8Q9BY41 377 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 TM6SF2Q9BZW4 377 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 SLC39A8Q9C0K1 460 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 ZDHHC6Q9H6R6 413 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 LRRC19Q9H756 370 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 PREBQ9HCU5 417 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 LUC7LQ9NQ29 371 aaKnown RBP7.1□□□□□ -1.27
TOP3A-207ENST00000493648 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.1□□□□□ -1.27
TOP3A-207ENST00000493648 SPTLC3Q9NUV7 552 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 UBA2Q9UBT2 640 aaPredicted RBP7.1□□□□□ -1.27
TOP3A-207ENST00000493648 INTUQ9ULD6 942 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 ACTL7AQ9Y615 435 aa7.1□□□□□ -1.27
TOP3A-207ENST00000493648 NYNRINQ9P2P1 1898 aaKnown RBP7.1□□□□□ -1.27
TOP3A-207ENST00000493648 A0A1B0GVT2 93 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 TMEM110-MUSTN1A8MSY1 372 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 J3KR12 359 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 DFFAO00273 331 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 KRIT1O00522 736 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 TM4SF5O14894 197 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 DFNA5O60443 496 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 PRAMEF11O60813 436 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 RNGTTO60942 597 aaKnown RBP7.09□□□□□ -1.27
TOP3A-207ENST00000493648 PALMO75781 387 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 TMCC1O94876 653 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 PROSCO94903 275 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 PCDH8O95206 1070 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 CER1O95813 267 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 IGHV4-34P06331 123 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 KRT7P08729 469 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 TCF4P15884 667 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 AMPD1P23109 780 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 ITGB7P26010 798 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms