RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 CREBRFQ8IUR6 639 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 ARRDC3Q96B67 414 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 TBATAQ96M53 351 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 ZNF578Q96N58 590 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-212ENST00000492407 HEPHQ9BQS7 1158 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 SLC17A9Q9BYT1 436 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 STK33Q9BYT3 514 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 ZYG11BQ9C0D3 744 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 ZNF212Q9UDV6 495 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 DACH1Q9UI36 760 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 TMEM59LQ9UK28 342 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 ACACAQ13085 2346 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 A0A0D9SEW6 157 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 SPTY2D1-AS1A0A0U1RR47 76 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 TEX51A0A1B0GUA7 166 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 I6L893 689 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-212ENST00000492407 K7ERQ8 282 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 TPP1O14773 563 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 ATXN7O15265 892 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-212ENST00000492407 SLC31A1O15431 190 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 SMAD6O43541 496 aaKnown RBP9.31□□□□□ -0.92
HDAC3-212ENST00000492407 TLX3O43711 291 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-212ENST00000492407 SNAP91O60641 907 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 ZNF821O75541 412 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-212ENST00000492407 LEFTY1O75610 366 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 PCDH8O95206 1070 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 CSF2P04141 144 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 GIMD1P0DJR0 217 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 ADRB3P13945 408 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 RRM1P23921 792 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 RABIFP47224 123 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 MAPKAPK2P49137 400 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 UCNP55089 124 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 ERVPABLB-1P60509 514 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 DAB2P98082 770 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 SEMG2Q02383 582 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 GNA12Q03113 381 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 C19orf57Q0VDD7 668 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 DRAP1Q14919 205 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-212ENST00000492407 ZRSR2Q15696 482 aaKnown RBP9.31□□□□□ -0.92
HDAC3-212ENST00000492407 TBC1D25Q3MII6 688 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 ARL13BQ3SXY8 428 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 ARSIQ5FYB1 569 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 ARTNQ5T4W7 220 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 FAM102AQ5T9C2 384 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-212ENST00000492407 KLHDC7AQ5VTJ3 777 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 GCNT7Q6ZNI0 430 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 DPY19L3Q6ZPD9 716 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 Q6ZSR6 202 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 DENND6BQ8NEG7 585 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 TPCN2Q8NHX9 752 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 BTN2A2Q8WVV5 523 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 CASKIN2Q8WXE0 1202 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 ARHGEF26Q96DR7 871 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 WBP1Q96G27 269 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 BBC3Q96PG8 261 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-212ENST00000492407 DEPDC7Q96QD5 511 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 TBCBQ99426 244 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 TUBGCP2Q9BSJ2 902 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 C1QTNF2Q9BXJ5 285 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 NAA15Q9BXJ9 866 aaKnown RBP9.31□□□□□ -0.92
HDAC3-212ENST00000492407 OSBPL1AQ9BXW6 950 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 OSBPL2Q9H1P3 480 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 PLCB1Q9NQ66 1216 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 ANLNQ9NQW6 1124 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 SALL4Q9UJQ4 1053 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 ZFR2Q9UPR6 939 aaKnown RBP9.31□□□□□ -0.92
HDAC3-212ENST00000492407 FADS3Q9Y5Q0 445 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 WASF2Q9Y6W5 498 aa9.31□□□□□ -0.92
HDAC3-212ENST00000492407 URB1O60287 2271 aaKnown RBP9.31□□□□□ -0.92
HDAC3-212ENST00000492407 PLXNA2O75051 1894 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 FASNP49327 2511 aaKnown RBP9.3□□□□□ -0.92
HDAC3-212ENST00000492407 GOLGA6CA6NDK9 693 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 GOLGA6BA6NDN3 693 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 ZSCAN5CA6NGD5 496 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-212ENST00000492407 H3BM21 787 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 FPGTO14772 594 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 BNIP3LO60238 219 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 OPA1O60313 960 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 BRINP1O60477 761 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 GSRP00390 522 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 GOLGA6DP0CG33 693 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 UCHL3P15374 230 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 NME1P15531 152 aaKnown RBP9.3□□□□□ -0.92
HDAC3-212ENST00000492407 RHOQP17081 205 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 EEF1GP26641 437 aaKnown RBP9.3□□□□□ -0.92
HDAC3-212ENST00000492407 LSSP48449 732 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 SUOXP51687 545 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 RNASE9P60153 205 aaKnown RBP9.3□□□□□ -0.92
HDAC3-212ENST00000492407 APBA1Q02410 837 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 SGCGQ13326 291 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 MIIPQ5JXC2 388 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 ZCCHC8Q6NZY4 707 aaKnown RBP9.3□□□□□ -0.92
HDAC3-212ENST00000492407 GPR155Q7Z3F1 870 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 PARGQ86W56 976 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 CHST14Q8NCH0 376 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 ZNF248Q8NDW4 579 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 OR13H1Q8NG92 308 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 WDR48Q8TAF3 677 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 BMFQ96LC9 184 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms