RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 MYCP01106 439 aaPredicted RBP12.63□□□□□ -0.39
HMGN1-220ENST00000492280 PIRTP0C851 137 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 RPL9P32969 192 aaKnown RBP12.63□□□□□ -0.39
HMGN1-220ENST00000492280 MAGEA12P43365 314 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 GRIA4P48058 902 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 MBTPS1Q14703 1052 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 CLLU1OSQ5K130 101 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 LRRC74BQ6ZQY2 392 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.63□□□□□ -0.39
HMGN1-220ENST00000492280 RNF148Q8N7C7 305 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 SCG3Q8WXD2 468 aaKnown RBP12.63□□□□□ -0.39
HMGN1-220ENST00000492280 DNAJC9Q8WXX5 260 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 SPC25Q9HBM1 224 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 GMIPQ9P107 970 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 ABT1Q9ULW3 272 aaKnown RBP12.63□□□□□ -0.39
HMGN1-220ENST00000492280 RUVBL2Q9Y230 463 aaKnown RBP12.63□□□□□ -0.39
HMGN1-220ENST00000492280 TNFRSF10BO14763 440 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 NVLO15381 856 aaKnown RBP12.62□□□□□ -0.39
HMGN1-220ENST00000492280 HNRNPCL1O60812 293 aaKnown RBP12.62□□□□□ -0.39
HMGN1-220ENST00000492280 PIGNO95427 931 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 MT-CO1P00395 513 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 IGLV3-25P01717 112 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 PAX7P23759 505 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 CCR1P32246 355 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 HCAR3P49019 387 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 AIF1P55008 147 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 GRIK3Q13003 919 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 ANO7Q6IWH7 933 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 CNSTQ6PJW8 725 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 FSTL5Q8N475 847 aaPredicted RBP12.62□□□□□ -0.39
HMGN1-220ENST00000492280 LINC01599Q8WXQ3 324 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 NOL6Q9H6R4 1146 aaKnown RBP12.62□□□□□ -0.39
HMGN1-220ENST00000492280 CHST12Q9NRB3 414 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 TRHDEQ9UKU6 1024 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 KCTD3Q9Y597 815 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 DOCK4Q8N1I0 1966 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 UNC80Q8N2C7 3258 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 A0A088AWK7 358 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 FAM95CA0A1B0GW59 222 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 M0QZQ0 153 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 SCAMP3O14828 347 aaKnown RBP12.62□□□□□ -0.39
HMGN1-220ENST00000492280 MAP3K13O43283 966 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 TM7SF2O76062 418 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 TSPAN8P19075 237 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 DSC2Q02487 901 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 SLC10A7Q0GE19 358 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 PRPSAP1Q14558 356 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 ARL13AQ5H913 290 aaPredicted RBP12.62□□□□□ -0.39
HMGN1-220ENST00000492280 MFSD14CQ5VZR4 134 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 MRPL10Q7Z7H8 261 aaKnown RBP12.62□□□□□ -0.39
HMGN1-220ENST00000492280 HPS6Q86YV9 775 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 DEFB107AQ8IZN7 70 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 RAB3IL1Q8TBN0 382 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 HMCESQ96FZ2 354 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 ELMO2Q96JJ3 720 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 MRGPRX2Q96LB1 330 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 C1QTNF1Q9BXJ1 281 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 CDH19Q9H159 772 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 ARHGEF38Q9NXL2 777 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 IPO11Q9UI26 975 aaKnown RBP12.62□□□□□ -0.39
HMGN1-220ENST00000492280 TLK1Q9UKI8 766 aa12.62□□□□□ -0.39
HMGN1-220ENST00000492280 SEPT4O43236 478 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 HNRNPLP14866 589 aaKnown RBP eCLIP12.61□□□□□ -0.39
HMGN1-220ENST00000492280 CD86P42081 329 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 COPAP53621 1224 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 TAS2R39P59534 338 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 DSC3Q14574 896 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 NXNQ6DKJ4 435 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 ISLR2Q6UXK2 745 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 TMEM151AQ8N4L1 468 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 CATSPER2Q96P56 530 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 TSPAN18Q96SJ8 248 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 SUDS3Q9H7L9 328 aaPredicted RBP12.61□□□□□ -0.39
HMGN1-220ENST00000492280 ZDHHC2Q9UIJ5 367 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 PCDHB12Q9Y5F1 795 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 TRIM13O60858 407 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 SLC4A1P02730 911 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 HDCP19113 662 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 HARS2P49590 506 aaKnown RBP12.61□□□□□ -0.39
HMGN1-220ENST00000492280 NAB1Q13506 487 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 CSHL1Q14406 222 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 ANO4Q32M45 955 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 RAP1GAP2Q684P5 730 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 PKN3Q6P5Z2 889 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 PTAR1Q7Z6K3 402 aaPredicted RBP12.61□□□□□ -0.39
HMGN1-220ENST00000492280 THEM5Q8N1Q8 247 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 SH3TC2Q8TF17 1288 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 ZNF333Q96JL9 665 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 GPR22Q99680 433 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 MCMBPQ9BTE3 642 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 TUBB6Q9BUF5 446 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 KIFC1Q9BW19 673 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 CRISPLD1Q9H336 500 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 SMOC2Q9H3U7 446 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 ABCC13Q9NSE7 274 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 STOML1Q9UBI4 398 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 AIM2O14862 343 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 TIMM44O43615 452 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 CIB2O75838 187 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 AOC1P19801 751 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms