RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 PTPRQQ9UMZ3 2332 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 CELSR3Q9NYQ7 3312 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 A0A1W2PQU0 124 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 WASH4PA8MWX3 477 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 GOLGA8SH3BPF8 625 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 CBX4O00257 560 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 SRGAP2O75044 1071 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 LEFTY1O75610 366 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 LRIG2O94898 1065 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 LDOC1O95751 146 aaPredicted RBP8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 ITGAVP06756 1048 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 PLEKP08567 350 aaPredicted RBP8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 KRT3P12035 628 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 ADRB3P13945 408 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 ACP1P24666 158 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 MAT2AP31153 395 aaKnown RBP8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 SDC4P31431 198 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 L1CAMP32004 1257 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 ETFBP38117 255 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 STAT1P42224 750 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 COPB1P53618 953 aaKnown RBP8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 ATP11AP98196 1134 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 ZNF211Q13398 564 aaPredicted RBP8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 FGL2Q14314 439 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 CLEC16AQ2KHT3 1053 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 C15orf59Q2T9L4 293 aaPredicted RBP8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 POM121L1PQ3SYA9 428 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 CARD16Q5EG05 197 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 FKBP15Q5T1M5 1219 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 FBXL19Q6PCT2 694 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 DCP2Q8IU60 420 aaKnown RBP8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 EID2Q8N6I1 236 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 PDCD7Q8N8D1 485 aaKnown RBP8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 C3orf20Q8ND61 904 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 KLHDC7BQ96G42 594 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 CNDP2Q96KP4 475 aaKnown RBP8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 BMFQ96LC9 184 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 LENG8Q96PV6 779 aaPredicted RBP8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 KLF6Q99612 283 aaPredicted RBP8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 HEPHQ9BQS7 1158 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 MAGEB5Q9BZ81 275 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 SCUBE2Q9NQ36 999 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 MFHAS1Q9Y4C4 1052 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 FADS3Q9Y5Q0 445 aa8.54□□□□□ -1.04
SMARCB1-207ENST00000491967 LRRK1Q38SD2 2015 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 A0A087WV48 116 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 KPNA3O00505 521 aaPredicted RBP8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 TRIM38O00635 465 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 AREL1O15033 823 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 SPINT1O43278 529 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 KDELR3O43731 214 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 RFPL3O75679 317 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 GSRP00390 522 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 CALB1P05937 261 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 CKMT2P17540 419 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 HNRNPA2B1P22626 353 aaKnown RBP8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 DGKAP23743 735 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 ACVRL1P37023 503 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 CCNHP51946 323 aaPredicted RBP8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 NEK3P51956 506 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 ZNF143P52747 638 aaPredicted RBP8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 GEMIN4P57678 1058 aaKnown RBP8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 RPS21P63220 83 aaKnown RBP8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 MYL5Q02045 173 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 C1QBPQ07021 282 aaKnown RBP8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 DNAJC3Q13217 504 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 RTP5Q14D33 572 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 SYCP1Q15431 976 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 ARL13BQ3SXY8 428 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 KIAA1161Q6NSJ0 714 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 WDR59Q6PJI9 974 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 DHRS13Q6UX07 377 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 GCNT7Q6ZNI0 430 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 IRF2BP2Q7Z5L9 587 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 MARCH9Q86YJ5 346 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 SLC22A18ASQ8N1D0 253 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 CCDC185Q8N715 623 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 MDM1Q8TC05 714 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 BAP1Q92560 729 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 RAB7BQ96AH8 199 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 PPP1R16AQ96I34 528 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 FEM1CQ96JP0 617 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 C11orf70Q9BRQ4 267 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 SPON2Q9BUD6 331 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 SLC17A9Q9BYT1 436 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 TNKS2Q9H2K2 1166 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 ATP13A1Q9HD20 1204 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 NLRC4Q9NPP4 1024 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 ANO10Q9NW15 660 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 ADAM22Q9P0K1 906 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 RALYQ9UKM9 306 aaKnown RBP8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 MYO6Q9UM54 1294 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 CA5BQ9Y2D0 317 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 ACTL7AQ9Y615 435 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 RP1P56715 2156 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 LAMA5O15230 3695 aa8.53□□□□□ -1.04
SMARCB1-207ENST00000491967 COL27A1Q8IZC6 1860 aaPredicted RBP8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 LY6G6EA0A0G2JKS1 128 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 FAM149AA5PLN7 773 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 ZSCAN5CA6NGD5 496 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms