RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 IGSF6O95976 241 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 ADH1BP00325 375 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 IGLV3-19P01714 112 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 PRNPP04156 253 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 SP9P0CG40 484 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 PRLRP16471 622 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 C5AR1P21730 350 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 RHOAP61586 193 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 DYNLT1P63172 113 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 IFI35P80217 286 aaPredicted RBP16.09■□□□□ 0.17
TRA2A-208ENST00000490942 CSTF1Q05048 431 aaKnown RBP16.09■□□□□ 0.17
TRA2A-208ENST00000490942 RAD51Q06609 339 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 PRKD1Q15139 912 aaPredicted RBP16.09■□□□□ 0.17
TRA2A-208ENST00000490942 NOMO1Q15155 1222 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 CCDC181Q5TID7 509 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 ANO7Q6IWH7 933 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 USP30Q70CQ3 517 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 SLC13A5Q86YT5 568 aaPredicted RBP16.09■□□□□ 0.17
TRA2A-208ENST00000490942 ZBTB44Q8NCP5 570 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 MDGA1Q8NFP4 955 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 FAM129BQ96TA1 746 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 VAT1Q99536 393 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 FERMT1Q9BQL6 677 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 HEPHQ9BQS7 1158 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 CINPQ9BW66 212 aaPredicted RBP16.09■□□□□ 0.17
TRA2A-208ENST00000490942 HEMGNQ9BXL5 484 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 OSBPL1AQ9BXW6 950 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 CPEB1Q9BZB8 566 aaKnown RBP16.09■□□□□ 0.17
TRA2A-208ENST00000490942 TTC7AQ9ULT0 858 aaPredicted RBP16.09■□□□□ 0.17
TRA2A-208ENST00000490942 ZKSCAN5Q9Y2L8 839 aa16.09■□□□□ 0.17
TRA2A-208ENST00000490942 CACNA1HO95180 2353 aa16.08■□□□□ 0.17
TRA2A-208ENST00000490942 C1QTNF3-AMACRE9PGA6 284 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 PECAM1P16284 738 aaPredicted RBP16.08■□□□□ 0.16
TRA2A-208ENST00000490942 NDUFV2P19404 249 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 CHRNA3P32297 505 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 MMP13P45452 471 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 GNG11P61952 73 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 AP1S1P61966 158 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 RPS14P62263 151 aaKnown RBP16.08■□□□□ 0.16
TRA2A-208ENST00000490942 SLC10A7Q0GE19 358 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 CCDC15Q0P6D6 951 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 ZNF211Q13398 564 aaPredicted RBP16.08■□□□□ 0.16
TRA2A-208ENST00000490942 ZNF235Q14590 738 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 TTC31Q49AM3 519 aaPredicted RBP16.08■□□□□ 0.16
TRA2A-208ENST00000490942 ALG1LQ6GMV1 187 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 DPY19L3Q6ZPD9 716 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 KBTBD6Q86V97 674 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 ZNF366Q8N895 744 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 CCNYQ8ND76 341 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 ACTL9Q8TC94 416 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 HCAR2Q8TDS4 363 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 TFB1MQ8WVM0 346 aaKnown RBP16.08■□□□□ 0.16
TRA2A-208ENST00000490942 HMGB4Q8WW32 186 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 HAUS1Q96CS2 278 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 SIPA1Q96FS4 1042 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 TUBGCP5Q96RT8 1024 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 IL12RB2Q99665 862 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 MGME1Q9BQP7 344 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 HERPUD2Q9BSE4 406 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 ITM2CQ9NQX7 267 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 USP36Q9P275 1121 aaKnown RBP16.08■□□□□ 0.16
TRA2A-208ENST00000490942 BCCIPQ9P287 314 aaKnown RBP eCLIP16.08■□□□□ 0.16
TRA2A-208ENST00000490942 HECAQ9UBI9 543 aaPredicted RBP16.08■□□□□ 0.16
TRA2A-208ENST00000490942 LHX3Q9UBR4 397 aa16.08■□□□□ 0.16
TRA2A-208ENST00000490942 ARIH1Q9Y4X5 557 aaPredicted RBP16.08■□□□□ 0.16
TRA2A-208ENST00000490942 DNTTP04053 509 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 TUBB4AP04350 444 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 CCNB1P14635 433 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 VAV1P15498 845 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 TCP1P17987 556 aaKnown RBP16.07■□□□□ 0.16
TRA2A-208ENST00000490942 CR2P20023 1033 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 OXTRP30559 389 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 NUMBP49757 651 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 DNA2P51530 1060 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 CCNHP51946 323 aaPredicted RBP16.07■□□□□ 0.16
TRA2A-208ENST00000490942 PTPN5P54829 565 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 OTUD4Q01804 1114 aaKnown RBP16.07■□□□□ 0.16
TRA2A-208ENST00000490942 CST6Q15828 149 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 MYLK3Q32MK0 819 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 USP39Q53GS9 565 aaKnown RBP16.07■□□□□ 0.16
TRA2A-208ENST00000490942 SLC45A4Q5BKX6 768 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 ZC3H14Q6PJT7 736 aaKnown RBP16.07■□□□□ 0.16
TRA2A-208ENST00000490942 NPNTQ6UXI9 565 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 CDKL3Q8IVW4 592 aaPredicted RBP16.07■□□□□ 0.16
TRA2A-208ENST00000490942 STK40Q8N2I9 435 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 RASGEF1CQ8N431 466 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 NETO2Q8NC67 525 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 SPOCK2Q92563 424 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 FAM131CQ96AQ9 280 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 QKIQ96PU8 341 aaKnown RBP eCLIP16.07■□□□□ 0.167e-14■■■□□ 14.7
TRA2A-208ENST00000490942 NAP1L3Q99457 506 aaPredicted RBP16.07■□□□□ 0.16
TRA2A-208ENST00000490942 LGMNQ99538 433 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 PABPC3Q9H361 631 aaKnown RBP16.07■□□□□ 0.16
TRA2A-208ENST00000490942 MTG2Q9H4K7 406 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 POLR3BQ9NW08 1133 aaPredicted RBP16.07■□□□□ 0.16
TRA2A-208ENST00000490942 IL36AQ9UHA7 158 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 FZD4Q9ULV1 537 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 SNX12Q9UMY4 172 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 WASF2Q9Y6W5 498 aa16.07■□□□□ 0.16
TRA2A-208ENST00000490942 NYNRINQ9P2P1 1898 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms