RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 SEPT10Q9P0V9 454 aa17.01■□□□□ 0.31
SFXN5-220ENST00000490056 BCCIPQ9P287 314 aaKnown RBP eCLIP17.01■□□□□ 0.31
SFXN5-220ENST00000490056 TTC24A2A3L6 582 aaPredicted RBP17■□□□□ 0.31
SFXN5-220ENST00000490056 H7C0C1 242 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 RNF103O00237 685 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 MCF2LO15068 1137 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 ALDH1A2O94788 518 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 GSRP00390 522 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 JCHAINP01591 159 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 CTSLP07711 333 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 CCNB1P14635 433 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 MMP13P45452 471 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 RECQLP46063 649 aaPredicted RBP17■□□□□ 0.31
SFXN5-220ENST00000490056 ATP5OP48047 213 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 FNTBP49356 437 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 CCNHP51946 323 aaPredicted RBP17■□□□□ 0.31
SFXN5-220ENST00000490056 EIF3EP60228 445 aaKnown RBP17■□□□□ 0.31
SFXN5-220ENST00000490056 RPS14P62263 151 aaKnown RBP17■□□□□ 0.31
SFXN5-220ENST00000490056 PRKD1Q15139 912 aaPredicted RBP17■□□□□ 0.31
SFXN5-220ENST00000490056 MARC1Q5VT66 337 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 TIGD7Q6NT04 549 aaPredicted RBP17■□□□□ 0.31
SFXN5-220ENST00000490056 KIAA1324Q6UXG2 1013 aaKnown RBP17■□□□□ 0.31
SFXN5-220ENST00000490056 METTL3Q86U44 580 aaKnown RBP17■□□□□ 0.31
SFXN5-220ENST00000490056 PGBD5Q8N414 524 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 OR2AP1Q8NGE2 309 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 COG1Q8WTW3 980 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 NSMCE1Q8WV22 266 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 TFB1MQ8WVM0 346 aaKnown RBP17■□□□□ 0.31
SFXN5-220ENST00000490056 OR8D1Q8WZ84 308 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 MS4A14Q96JA4 679 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 PBKQ96KB5 322 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 NAPGQ99747 312 aaPredicted RBP17■□□□□ 0.31
SFXN5-220ENST00000490056 CEP41Q9BYV8 373 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 RSPH9Q9H1X1 276 aaPredicted RBP17■□□□□ 0.31
SFXN5-220ENST00000490056 NT5MQ9NPB1 228 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 HECAQ9UBI9 543 aaPredicted RBP17■□□□□ 0.31
SFXN5-220ENST00000490056 SEPT3Q9UH03 358 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 SARDHQ9UL12 918 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 SNX12Q9UMY4 172 aa17■□□□□ 0.31
SFXN5-220ENST00000490056 ZNF185O15231 689 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 INSIG1O15503 277 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 ZBTB24O43167 697 aaPredicted RBP16.99■□□□□ 0.31
SFXN5-220ENST00000490056 GJB3O75712 270 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 FGGP02679 453 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 SP9P0CG40 484 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 CHRNA3P32297 505 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 PSMD8P48556 350 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 METAP1P53582 386 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 MAXP61244 160 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 SNRPD1P62314 119 aaKnown RBP16.99■□□□□ 0.31
SFXN5-220ENST00000490056 ZBTB17Q13105 803 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 HNRNPDQ14103 355 aaKnown RBP16.99■□□□□ 0.31
SFXN5-220ENST00000490056 ELAVL3Q14576 367 aaKnown RBP16.99■□□□□ 0.31
SFXN5-220ENST00000490056 ZNF235Q14590 738 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 MYLK3Q32MK0 819 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 POM121L1PQ3SYA9 428 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 ZNF776Q68DI1 518 aaPredicted RBP16.99■□□□□ 0.31
SFXN5-220ENST00000490056 RASSF3Q86WH2 238 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 TEX26Q8N6G2 289 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 ATG4AQ8WYN0 398 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 SIPA1Q96FS4 1042 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 CCDC114Q96M63 670 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 QKIQ96PU8 341 aaKnown RBP eCLIP16.99■□□□□ 0.315e-7■■■■■ 32.9
SFXN5-220ENST00000490056 HEPHQ9BQS7 1158 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 BRD8Q9H0E9 1235 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 ZDHHC6Q9H6R6 413 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 CD93Q9NPY3 652 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 RBM22Q9NW64 420 aaKnown RBP eCLIP16.99■□□□□ 0.31
SFXN5-220ENST00000490056 SMARCAL1Q9NZC9 954 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 EBF1Q9UH73 591 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 EVLQ9UI08 416 aaPredicted RBP16.99■□□□□ 0.31
SFXN5-220ENST00000490056 FBXO4Q9UKT5 387 aa16.99■□□□□ 0.31
SFXN5-220ENST00000490056 FARP1Q9Y4F1 1045 aaPredicted RBP16.99■□□□□ 0.31
SFXN5-220ENST00000490056 CTAGE9A4FU28 777 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 HACD1B0YJ81 288 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 KRIT1O00522 736 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 AXIN1O15169 862 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 MID1O15344 667 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 RNASEH1O60930 286 aaKnown RBP16.98■□□□□ 0.31
SFXN5-220ENST00000490056 IGSF6O95976 241 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 IL1BP01584 269 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 RBP3P10745 1247 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 RBL1P28749 1068 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 HOXA6P31267 233 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 RENBPP51606 427 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 NUBP1P53384 320 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 ETF1P62495 437 aaKnown RBP16.98■□□□□ 0.31
SFXN5-220ENST00000490056 IFI35P80217 286 aaPredicted RBP16.98■□□□□ 0.31
SFXN5-220ENST00000490056 XRCC4Q13426 336 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 SIX1Q15475 284 aaPredicted RBP16.98■□□□□ 0.31
SFXN5-220ENST00000490056 LONRF2Q1L5Z9 754 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 SLC45A4Q5BKX6 768 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 ARSIQ5FYB1 569 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 PAPD7Q5XG87 772 aaKnown RBP16.98■□□□□ 0.31
SFXN5-220ENST00000490056 DARS2Q6PI48 645 aaKnown RBP16.98■□□□□ 0.31
SFXN5-220ENST00000490056 PLPP6Q8IY26 295 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 RASGEF1CQ8N431 466 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.98■□□□□ 0.31
SFXN5-220ENST00000490056 TTC13Q8NBP0 860 aa16.98■□□□□ 0.31
SFXN5-220ENST00000490056 PIP4K2CQ8TBX8 421 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms