RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 SERPINH1P50454 418 aaKnown RBP16.19■□□□□ 0.18
PLOD3-216ENST00000489927 HNRNPKP61978 463 aaKnown RBP eCLIP16.19■□□□□ 0.18
PLOD3-216ENST00000489927 RPS21P63220 83 aaKnown RBP16.19■□□□□ 0.18
PLOD3-216ENST00000489927 GABREP78334 506 aa16.19■□□□□ 0.18
PLOD3-216ENST00000489927 ARF5P84085 180 aa16.19■□□□□ 0.18
PLOD3-216ENST00000489927 FZD2Q14332 565 aa16.19■□□□□ 0.18
PLOD3-216ENST00000489927 FAM102AQ5T9C2 384 aaPredicted RBP16.19■□□□□ 0.18
PLOD3-216ENST00000489927 KIAA1161Q6NSJ0 714 aa16.19■□□□□ 0.18
PLOD3-216ENST00000489927 RETSATQ6NUM9 610 aa16.19■□□□□ 0.18
PLOD3-216ENST00000489927 PCSK4Q6UW60 755 aa16.19■□□□□ 0.18
PLOD3-216ENST00000489927 DCP2Q8IU60 420 aaKnown RBP16.19■□□□□ 0.18
PLOD3-216ENST00000489927 FAM71AQ8IYT1 594 aa16.19■□□□□ 0.18
PLOD3-216ENST00000489927 FAM181AQ8N9Y4 354 aa16.19■□□□□ 0.18
PLOD3-216ENST00000489927 TMEM35BQ8NCS4 154 aa16.19■□□□□ 0.18
PLOD3-216ENST00000489927 ZNF248Q8NDW4 579 aa16.19■□□□□ 0.18
PLOD3-216ENST00000489927 FAM174AQ8TBP5 190 aa16.19■□□□□ 0.18
PLOD3-216ENST00000489927 HIC2Q96JB3 615 aa16.19■□□□□ 0.18
PLOD3-216ENST00000489927 ZNF578Q96N58 590 aaPredicted RBP16.19■□□□□ 0.18
PLOD3-216ENST00000489927 OSBPL2Q9H1P3 480 aa16.19■□□□□ 0.18
PLOD3-216ENST00000489927 ATP13A1Q9HD20 1204 aa16.19■□□□□ 0.18
PLOD3-216ENST00000489927 FADS3Q9Y5Q0 445 aa16.19■□□□□ 0.18
PLOD3-216ENST00000489927 CSO75390 466 aaKnown RBP16.18■□□□□ 0.18
PLOD3-216ENST00000489927 L1CAMP32004 1257 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 CDH5P33151 784 aaPredicted RBP16.18■□□□□ 0.18
PLOD3-216ENST00000489927 FLT3P36888 993 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 MTIF2P46199 727 aaKnown RBP16.18■□□□□ 0.18
PLOD3-216ENST00000489927 DNA2P51530 1060 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 CCNHP51946 323 aaPredicted RBP16.18■□□□□ 0.18
PLOD3-216ENST00000489927 PCBP4P57723 403 aaKnown RBP16.18■□□□□ 0.18
PLOD3-216ENST00000489927 CAMK4Q16566 473 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 C2CD6Q53TS8 623 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 ACBD5Q5T8D3 534 aaPredicted RBP16.18■□□□□ 0.18
PLOD3-216ENST00000489927 TRNP1Q6NT89 227 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 KYAT3Q6YP21 454 aaKnown RBP16.18■□□□□ 0.18
PLOD3-216ENST00000489927 ZNF783Q6ZMS7 281 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 XYLT1Q86Y38 959 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 ZNF843Q8N446 348 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 PCDH20Q8N6Y1 951 aaKnown RBP16.18■□□□□ 0.18
PLOD3-216ENST00000489927 ZNF548Q8NEK5 533 aaPredicted RBP16.18■□□□□ 0.18
PLOD3-216ENST00000489927 C18orf8Q96DM3 657 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 FEM1CQ96JP0 617 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 HEPHQ9BQS7 1158 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 DUSP23Q9BVJ7 150 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 CEP44Q9C0F1 390 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 ABCG4Q9H172 646 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 PDCL3Q9H2J4 239 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 USP29Q9HBJ7 922 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 KIAA1468Q9P260 1216 aa16.18■□□□□ 0.18
PLOD3-216ENST00000489927 SPTY2D1-AS1A0A0U1RR47 76 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 DXOO77932 396 aaKnown RBP16.17■□□□□ 0.18
PLOD3-216ENST00000489927 CSF2P04141 144 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 NME1P15531 152 aaKnown RBP16.17■□□□□ 0.18
PLOD3-216ENST00000489927 CYP11B1P15538 503 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 SCNN1AP37088 669 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 LSSP48449 732 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 DUSP3P51452 185 aaPredicted RBP16.17■□□□□ 0.18
PLOD3-216ENST00000489927 BPIFB4P59827 614 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 SLC20A2Q08357 652 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 CARD16Q5EG05 197 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 DPY19L2P1Q6NXN4 242 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 PARS2Q7L3T8 475 aaKnown RBP16.17■□□□□ 0.18
PLOD3-216ENST00000489927 BNIPLQ7Z465 357 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 PARGQ86W56 976 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 FAM131BQ86XD5 332 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 LSMEM2Q8N112 164 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 IFI44Q8TCB0 444 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 MAPK15Q8TD08 544 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 HAPLN3Q96S86 360 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 KLF6Q99612 283 aaPredicted RBP16.17■□□□□ 0.18
PLOD3-216ENST00000489927 ZYG11BQ9C0D3 744 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 POLR1BQ9H9Y6 1135 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 KLF15Q9UIH9 416 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 FCF1Q9Y324 198 aaKnown RBP16.17■□□□□ 0.18
PLOD3-216ENST00000489927 ACTL7AQ9Y615 435 aa16.17■□□□□ 0.18
PLOD3-216ENST00000489927 GOLGA8SH3BPF8 625 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 SPINT1O43278 529 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 AP1G1O43747 822 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 CD160O95971 181 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 TGM2P21980 687 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 RABIFP47224 123 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 ERVPABLB-1P60509 514 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 GNA12Q03113 381 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 PDE1CQ14123 709 aaPredicted RBP16.16■□□□□ 0.18
PLOD3-216ENST00000489927 DRAP1Q14919 205 aaPredicted RBP16.16■□□□□ 0.18
PLOD3-216ENST00000489927 MAN2A1Q16706 1144 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 TPRG1LQ5T0D9 272 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 TAF3Q5VWG9 929 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 ZCCHC8Q6NZY4 707 aaKnown RBP16.16■□□□□ 0.18
PLOD3-216ENST00000489927 DRC7Q8IY82 874 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 CFAP57Q96MR6 1250 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 TM6SF2Q9BZW4 377 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 ZDHHC6Q9H6R6 413 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 CPNE5Q9HCH3 593 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 EVA1BQ9NVM1 165 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 TMEM51Q9NW97 253 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 HECAQ9UBI9 543 aaPredicted RBP16.16■□□□□ 0.18
PLOD3-216ENST00000489927 IPO11Q9UI26 975 aaKnown RBP16.16■□□□□ 0.18
PLOD3-216ENST00000489927 TMEM59LQ9UK28 342 aa16.16■□□□□ 0.18
PLOD3-216ENST00000489927 IGLON5A6NGN9 336 aa16.15■□□□□ 0.18
PLOD3-216ENST00000489927 H3BM21 787 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms